Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0819 ATGTGGTTGCCAAAGAATCATCAAACGGAGAAGAAGGAGGGTGTGAATGGATTAGTGGCAGTGGCAATAGACAAAGACAAAGGGAGCCAAAATGCACTGAAATGGGCCATTGACCATCTCCTCGTGAGAGGTTCAACTGTCGTTCTCATCCATGTCAAGGTTAAAGCAGCTTCCTTGTCTACATCACCTTCTCTTCAAACTCCAAGGATAAATGGTGATGAGAGTTCACTGATATGCAGAGATCCTGATGCCCAAACCAGGGAAATTTTCCTCCCATATCGTGTCTTTTGTACACGAAAAGATATACAATGCAAGGACGTCATACTGGAAGACGTAGACGTCGGCAAAGCTTTAATCGAGTATGCTTCACATTCAGCAATCGAGCATTTGGTTCTTGGTTCATCAAACAAATCTGGTCTGCTCAGAAGATTCAAGGCAACAGATATTCCGGGAACTGTATCAAAAGGGGCACCGGATTTCTGCACTGTGTATGCTGTTGCTAAAGGAAAAATTCATTCAATGCGATCTGCATCTCGTCCTGCTCCAGCCATTTCTCCTCTACGCTCCCAGCTTACTCAAGCAAGCACCAAGTCTGAGCAATCAGACCCGCAACTGCCTCTTGCCAATAATATGAGAGGACGTGATAGGCGATCCATTGAAACACCATATAAATCGCAGGATGAATCAGAAGGCTTCAGGTCACCATTCACTAGGAGGGGTTTGAATGGCAAGTCATATGGGGAAATATCCATGCCAGATACGGACATATCCTTTGTGAGCTCTGGAAGATCAAGTACAGATCGCTTGTTCTCTTCATTATATGACATCCCAGATACAGGGATGTCCAATCCTCGCCTATCATACAGCTCCGATATTGATGGAAACTATAGCTTTGAGTCGATGCAGTTTAATAATAGGAGGTCCATAGATATGCTCAGCCCTCCTCCTGAATTCTCATCAATCTCACAGGATAGTGACAGACTTTCTTCTTCCATATCGGGCCTGGATGACGTGGAGGCTGAAATGAGGAGACTAAAGTTGGAGCTGAAGCAAACAATGGAAATGTACAGCACGGCTTGTAAAGAAGCACTGACAGCAAAGCAGAAGGCAGTAGAACTGCAGCGTTGGAAACTAGAGGAAGAGCGGAGATTGGAAGAGGCAAGGCTGGCTGAGGAAGCTGCTTTGGCTGTTGCAGAAATGGAGAAGGCCAAATCCAAAGCCGCTATGGAGGCTGCAGAAGCACAAAAGAGGATTGCAGAACTGGAAGCACAAAAAAGACTTGGTGCAGAAATGAAAGCACTGAGAGAAGCAGAAGAAAAAAAGAAAGCACTTGATGCTTTAGTAAACATAGATGTCAGATATAGAAGGTATTCAATTGAGGATATTGAAGCCGCAACACAGTTCTTTACAGAGTCCCAGAAGATTGGAGAAGGGGGTTATGGTCCCGTATATCAGTGCTATCTGGACCATACACCCGTTGCAGTGAAGGTTCTACGTCCTGATGCAGCACAAGGAAGATCGCAGTTTCAACGAGAGGTAGAGGTACTGAGCTGCATACGGCATCCAAACATGGTTCTCCTGCTTGGAGCGTGCCCAGAATATGGGTGTCTTGTGTATGAGTTCATGGCTAATGGAAGCTTGGACGATCGTCTGTTTCGACGAGGAAACACTCCCCCGCTTCCGTGGCAGCTAAGGTTCAAAATAGCAGCTGAAATAGGGACTGGGTTGCTGTTCCTTCACCAGACAAAACCAGAGCCTCTGGTGCACAGGGACTTGAAACCAGCTAACATCTTATTAGACCGAAACTACGTAGCCAAGATCAGCGATGTAGGATTGGCGAGGCTAGTTCCACCATCTGTGGCTGACACCGTGACGCAATACCGCATGACATCCACTGCTGGAACATTCTGCTACATAGATCCAGAGTATCAGCAAACGGGAATGCTAGGGGTGAAATCTGACATATACTCTCTTGGCATCATTTTCCTACAACTGCTAACAGCAAGACCACCAATGGGTTTGACCCATCATGTTGAAAGGGCCATCGAGAAGGGAACATTCATGGATATGTTGGATTCAGCAGTGCCTGACTGGCCACAAGAGGAAGCCCTGAGCCTTGCCAAGTTGGCAATTAAGTGCGCAGAGCTAAGGCGGAAAGACAGACCTGATCTTGGCAAGGTTATCTTACCAGAACTCAACAGATTGAGAGCACTCGCTGAAACTACCAACCACCCTTCAGTTTTCGGCGGCTTTTTAAGCCCAAGCAACCAGAGCCAAGTTTCTGTACAGCTGGATGAAACCAGTCCCTCGCTTTCTCATTCTGGGTAG 2328 0.4661 MWLPKNHQTEKKEGVNGLVAVAIDKDKGSQNALKWAIDHLLVRGSTVVLIHVKVKAASLSTSPSLQTPRINGDESSLICRDPDAQTREIFLPYRVFCTRKDIQCKDVILEDVDVGKALIEYASHSAIEHLVLGSSNKSGLLRRFKATDIPGTVSKGAPDFCTVYAVAKGKIHSMRSASRPAPAISPLRSQLTQASTKSEQSDPQLPLANNMRGRDRRSIETPYKSQDESEGFRSPFTRRGLNGKSYGEISMPDTDISFVSSGRSSTDRLFSSLYDIPDTGMSNPRLSYSSDIDGNYSFESMQFNNRRSIDMLSPPPEFSSISQDSDRLSSSISGLDDVEAEMRRLKLELKQTMEMYSTACKEALTAKQKAVELQRWKLEEERRLEEARLAEEAALAVAEMEKAKSKAAMEAAEAQKRIAELEAQKRLGAEMKALREAEEKKKALDALVNIDVRYRRYSIEDIEAATQFFTESQKIGEGGYGPVYQCYLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEFMANGSLDDRLFRRGNTPPLPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQLLTARPPMGLTHHVERAIEKGTFMDMLDSAVPDWPQEEALSLAKLAIKCAELRRKDRPDLGKVILPELNRLRALAETTNHPSVFGGFLSPSNQSQVSVQLDETSPSLSHSG 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0819 775 FunFam U-box domain-containing protein 51 542 742 - -
Glsi10g0819 775 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 19 144 - -
Glsi10g0819 775 MobiDBLite consensus disorder prediction 213 234 - -
Glsi10g0819 775 ProSiteProfiles Protein kinase domain profile. 469 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0819 775 Coils Coil 361 381 - -
Glsi10g0819 775 MobiDBLite consensus disorder prediction 175 247 - -
Glsi10g0819 775 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 441 541 - -
Glsi10g0819 775 Coils Coil 395 431 - -
Glsi10g0819 775 Gene3D HUPs 19 155 IPR014729 -
Glsi10g0819 775 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Glsi10g0819 775 Coils Coil 335 355 - -
Glsi10g0819 775 Pfam Universal stress protein family 19 144 IPR006016 -
Glsi10g0819 775 PANTHER OS02G0152300 PROTEIN 19 753 - -
Glsi10g0819 775 Gene3D Transferase(Phosphotransferase) domain 1 542 746 - -
Glsi10g0819 775 MobiDBLite consensus disorder prediction 183 207 - -
Glsi10g0819 775 Gene3D Phosphorylase Kinase; domain 1 448 541 - -
Glsi10g0819 775 SUPERFAMILY Protein kinase-like (PK-like) 452 727 IPR011009 -
Glsi10g0819 775 Pfam Protein kinase domain 469 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0819 775 SMART serkin_6 469 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0819 775 CDD STK_N 18 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0819 Glsi-ChrGlsi10 5263752 5267004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0819 1 762 Receptor kinase-like Gene Family AT1G78940 57.436 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Glsi10g0819 Pkinase 1.1e-41 CL0016