Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0811 ATGGCGGTGGAGCTCATGGGGTTCACAAAAATGGACGATCAGAGGGCAATTCAGGAGGCTGCATCTGAGGGCTTAAAGGGCATGGAGCACCTCATCCGTCTCCTCTCCCATCAACCCAATCTCTTAGACTGTACTGACCTCACCGACGTCACCGTTTCGAAGTTCAAAAAACTCATTTCCCTTCTTAACCGCACCGGTCATGCCCGGTTCAGGCGAGCACCCCTTCCCTCCTCTTCGTCTTCTCCCTCAACTTCAACTTCGCCACCGCCATCGTCTGCCACGCCCTCCTCCCTCAACATTTCACAATCGCAAGTTTCGAATCTATCTCCGGCGCCCATCTTAAATCCGGTCACCGTGCATCACGCTCCGATCAACAACACTCCATCCAGTTTCGTTCCGGTTCAGTCACAGTCCGTGACTCTCGATTTCACAAAACCCAATATTTTGAGCTCCAACACCAAGTCCCTAGAGCTGGAGTTCTCGAAGGAAACCTTCAGCGTGTCCTCAAACTCATCGTTCATGTCGTCGGCCATCACCGGTGATGGAAGCGTCTCGAACGGCAAACAAGGATCGTCGATCTTCTTGACTCCGGCGGCACCAACCGTATCCGGTGGCGGGAAGCCACCTCTATCTACGGCGCCGATCAAGAAGAGATGCCACGACCACCGCGAGCACTCGGACGACGTCTCCGGCAAACTCTCGGGATCTAGCAAGTGCCACTGCATCAAGAGAAGGAAAAATCGGATGAAAAAGATCATGAGAGTGCCGGCGATTAGTTCGAAGATAGCGGATATCCCACCGGACGAGTTCTCGTGGAGGAAGTACGGTCAGAAGCCGATCAAGGGGTCACCGTACCCGCGGGGGTACTATAAGTGCAGTACAGTGAGAGGGTGCCCAGCGAGGAAACACGTGGAGCGGGCCCCGGATGATCCGACGATGCTGATCGTGACGTACGAGGGGGAGCACCGTCACGCGATTCAGACCACGATGCAGGAGAACATAGGTGGGAGCATGGATTTGGTATTCCAGTCAACGTGA 1038 0.5472 MAVELMGFTKMDDQRAIQEAASEGLKGMEHLIRLLSHQPNLLDCTDLTDVTVSKFKKLISLLNRTGHARFRRAPLPSSSSSPSTSTSPPPSSATPSSLNISQSQVSNLSPAPILNPVTVHHAPINNTPSSFVPVQSQSVTLDFTKPNILSSNTKSLELEFSKETFSVSSNSSFMSSAITGDGSVSNGKQGSSIFLTPAAPTVSGGGKPPLSTAPIKKRCHDHREHSDDVSGKLSGSSKCHCIKRRKNRMKKIMRVPAISSKIADIPPDEFSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPTMLIVTYEGEHRHAIQTTMQENIGGSMDLVFQST 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0811 345 ProSiteProfiles WRKY domain profile. 261 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi10g0811 345 SMART WRKY_cls 266 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi10g0811 345 FunFam WRKY transcription factor 65 250 327 - -
Glsi10g0811 345 Gene3D WRKY domain 253 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi10g0811 345 Pfam Plant zinc cluster domain 216 264 IPR018872 -
Glsi10g0811 345 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 328 IPR044810 GO:0003700
Glsi10g0811 345 Pfam WRKY DNA -binding domain 268 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi10g0811 345 SUPERFAMILY WRKY DNA-binding domain 264 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi10g0811 345 MobiDBLite consensus disorder prediction 74 105 - -
Glsi10g0811 345 MobiDBLite consensus disorder prediction 70 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0811 Glsi-ChrGlsi10 5190289 5191750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0811 1 344 WRKY Transcription Factor Family AT2G24570 61.538 1.85e-125 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi10g0811 WRKY 1.9e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0811 10 5190289 5191750 Glsi10g0811 10 5190289 5191750 ECH