LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi10g0810	ATGGCGGATTCGGTGAATGTTAACAGTGATAGTAAGATTGAGAAATTGATTTCTGCAAGGAAGTCATTGAAGCTTAGCCTAGAGAAATCAAAGTTCCTAGGGTTAACGTTAGAGAAGGCAGGGCCGAGACTGGAGGAGATTAGCCAAAGATTGCCTTCCCTTGAATCTGCAATTCGCCCCATTCGTGCTGACAAGGATGCCCTCGTGGCTGTTGCTGGTCACATAAATCGAGCGGTTGGTCCTGCAGCTGCTGTGCTTAAGGTTTTTGATGCCGTTCATGGCCTCGAAAAGTCACTCTTATCTGATCCACGTAATGATCTTCCCGGTTACTTGTCGGTGTTGAAGCGCCTTGAAGAGGCGCTGAGGTTCTTAGCGGATAACTGTGGATTAGCAATTCAGTGGTTGGAGGATATAGTGGAGTACTTAGAGGATAATAATGTTGCTGATGAAAGTTATCTCTCAAAATTGAAGAAGTCACTGCAAAATCTGCGGGAATTGCAAAATGACGAAGAAAAGGCACGGCTGGATGGTGGGCTTTTAGAAGCAGCAATGCAAAAACTGGAAAATGAGTTCCGGCTGCTCTTGACTGAAAACAGTGTGCCACTTCCAATGTCATCTTCGCCTTCACTTGCTGACCAAGCATGCATTGCTCCTTCACCTTTACCAGTACCTGTTATTCACAAGTTGCAAGCCATTCTTGGTAGATTAATTGCTAATAATAGACTTGAGAACTGCATATCAATTTATGTTGAAGTCCGTAGTTCTAATGTCAGAGCAAGCTTACAGGCTCTCAATTTGGATTACCTTGAGATCTCGATATCTGAATTCAATGATGTGCAGAGCATAGAGGGATATATAGCCCAGTGGGGGAAGCATTTAGAGTTTGCAGTGAAGCATTTGTTTGAGGCTGAGTATAAGCTTTGTAATGATGTATTTGAGAGGATTGGATTGGATGTGTGGATGGGTTGCTTTTCAAAGATAGCTGCTCAGGCTGGCATACTTGCATTTCTCCAATTTGGGAAGACTGTTACCGAGAGTAAGAAAGATCCAATTAAACTTTTGAAGTTGTTGGATATATTTGCATCTTTGAACAAACTGAGACTGGATTTCAACCGACTTTTTGGCGGAGAAGCATGTATTGAAATACAGAATTTGACTAGGGATCTAATCAAGAGAGTGATTGATGGGGCAGCAGAGATTTTCTGGGAGCTTATGGTTCAGGTAGAGTTACAGAGACAGAACCCCCCTCCCCTGGATGGCAACGTCCCAAGATTGGTGAGTTTTATTACTGATTACTGTAACAAACTCCTGGGGGATGACTATAAGCCAATTTTGACACAAGTTCTCATCATTCACCGAAGTTGGAAGCGTCAGAGCTTTCAGGAGAGACTCCTAGTTAATGAGGTATTGAACATAATGAAAGCGGTTGAATTGAATTTGGAAACATGGATCAAGGCTTATGATGATCCTGTGCTATCTAACTTCTTTGCTATGAACAATCACTGGCATCTGTACAAGCACTTGAAAGGAACAAAGCTTGGAGATCTCCTGGGGGAAACTAAGTTAAAAGAACATGAACAGTATAAGGACTATTACTCCACAATCTTCTTGAGGGATAGCTGGGGGAAGCTTCCTGGTCATTTGAGTAGGGAAGGGCTGATTCTGTTCTCAGGAGGGCGTGCTACTGCTCGTGATCTGGTCAAGAAAAGGTTGAAAAAGTTTAATGAAGTTTTTGATGATATGTATACAAAGCAGTCTGGTTGGGTTATGCCAGAACGAGATCTAAGAGAGAAGACATGTCAGCTTATAGTGCAAACTGTGGTGCCTGTTTACCGGAGTTACATGCAGAATTATGGACCCTTAGTTGAGCAAGATGCCAGCTCCACAAAATATGCAAAATACACGGTGCAGAAGCTGGAGGACATGCTCTTGTCTCTTTATCAGCCGAAGCCTGTGAGACATGCCAGTTTGAAAGGTCGGCAATTTAGTGCGAAATTTGGCAATGGAATGATGGATCTTCGTCGCACTGCCTCTGCAGTTGTGTAA	2046	0.4311	MADSVNVNSDSKIEKLISARKSLKLSLEKSKFLGLTLEKAGPRLEEISQRLPSLESAIRPIRADKDALVAVAGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLPGYLSVLKRLEEALRFLADNCGLAIQWLEDIVEYLEDNNVADESYLSKLKKSLQNLRELQNDEEKARLDGGLLEAAMQKLENEFRLLLTENSVPLPMSSSPSLADQACIAPSPLPVPVIHKLQAILGRLIANNRLENCISIYVEVRSSNVRASLQALNLDYLEISISEFNDVQSIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERIGLDVWMGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGEACIEIQNLTRDLIKRVIDGAAEIFWELMVQVELQRQNPPPLDGNVPRLVSFITDYCNKLLGDDYKPILTQVLIIHRSWKRQSFQERLLVNEVLNIMKAVELNLETWIKAYDDPVLSNFFAMNNHWHLYKHLKGTKLGDLLGETKLKEHEQYKDYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDDMYTKQSGWVMPERDLREKTCQLIVQTVVPVYRSYMQNYGPLVEQDASSTKYAKYTVQKLEDMLLSLYQPKPVRHASLKGRQFSAKFGNGMMDLRRTASAVV	681

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi10g0810	681	Coils	Coil	153	176	-	-
	Glsi10g0810	681	Gene3D	Exocyst complex component Exo70	136	655	-	-
	Glsi10g0810	681	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	118	642	IPR004140	GO:0000145\|GO:0006887
	Glsi10g0810	681	SUPERFAMILY	Cullin repeat-like	85	647	IPR016159	-
	Glsi10g0810	681	FunFam	Exocyst subunit Exo70 family protein	135	653	-	-
	Glsi10g0810	681	Pfam	Exo70 exocyst complex subunit	288	644	IPR046364	GO:0000145\|GO:0005546\|GO:0006887

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi10g0810	Glsi-ChrGlsi10	5184515	5186560	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi10g0810	1	681	EXO70 exocyst subunit family	AT4G31540	75.327	0.0	1063

Showing 1 to 1 of 1 entries