Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0783 ATGTTATTGCTTCTGCTGGTGACAGGGGTGGAGTGGAAAGTCAATTTAGATAATGGAGTTCAGCAGGATAGCCATGAGTTTCTGACATTGCTTCTGTCGTTGCTCGAGCGTTGTCTGAGCTATTCTAAAGTTCCCAAGGCAAGAACAATAGTTCAAGATCTTTTCCGGGGAAGCGTGTCTCACATGACAACGTGCTCACAATGTGGAAGAGTCTCTGAAGCTTCTTCTAAAATGGAAGACTTTTATGAGCTTGAGTTGAATGTCAAGGGATTGAGAAGTTTAGATGAGAGCCTAGACGATTTACCTCACTTTATGGGAGTAGATGAAGGATTGAACTGTTTTCATAATGAAGCACTACGTCTACCTAGTCCTTTGCTGGTGATTTCAGCAAGGAAACTGCTGTCATATGTGGGTATAATGGAGAAACATTTAGACAAACAATATGGCGGGGGGCCAACACTGTCCCATTGTGACTGCTGTTGGGACTGTCTTATTGATGGGGCTCATACTGTGGTGTCAGCTGACACCTATTGGGAAAGACAAGAATCAATTAAGCAACTTGCACGGGACATTCTTGATGGAAACTGTCCAGATGGAAAGTATTACATATCTGGACCATGGTTGCAACAGTGGTGGAAAAGAAAAGTCCTTGATGCTCCATCTGAAGCTGATGCTGGACCAACAGCATCAATTAGTTTCCCACATGAGCAACTTACGCCTGAGCAGGATGCTGGTGCTAAGTGGGTTCTTGTTCCTGAGAGCTTTTGGCCCTTCTTATATGAAGATGCTGTTTCTGTAAAACCTGATGATCTGGGTTGCCCTACTTTTCCTTCAGACTCCAAACTGTGTTCCCAATGCAGTAATGAATTATCTGAAGTAGCATGTTCGGAGAACTCTTTAAGTTACATTGTAACTTCACTTTGCTATTCTGTCATGTTTTGTATCTTGTTGCAAGGTGGCTTAACGATCATATCTGGGAATGACTGGAAATTCTCTTGTGAAGAATGGGGTGGTACTGAGACAAAAGGTGTATCTGCAACAATTGAGAGTATTAATTATTCAGAGACTGTTTGGACTGCATCCTGCCTAGAGACCCCAATTTGTGAGGATCAGTTGAACATTTGTGATAAAGTGAACAGTGATTGTGGTACTAGAGAAATTGTGATTAAGACTTGTCCAGAGATTTGTGAAAGTTGCATTGGAGAAAGAAAAAGCTGCGAATTAATGCAGAAACTTAACTATTGCAATGAGAACATATGTGTGATTCTTGTGCGGGGAAAGGAAGTACCTAGAGCAATATTAGAGGCTTCAGAGGGCTCTATTGAAACAGATTGGCGTGTTTCCAAGCGCTCCCGGAAGTCTAAAATTGGGAGTTCAATTAGTCTTAAAGTTTCTGCTTCAACATCACTGTACCAGCTAAAAATGATGATATGGGAATCCTTTGGGGAAAACCAGATACTACAGAAAGGTGATAGGACAATCGATATTGATGATGAATGTGCCACGCTTGCAGATTTGAACATATTTACTGGAGATCAGATTATAGTCAGGGATTCTGAGATCCATGAAAATCGAGACATTGCTGGTAATCTATGTGATATGGATGAGCTTTGTGATGAGAAAATGGATATGCAGCACTCTGAGGAAGGGTTTCGTGGAGCGCTTTTGACAGCAAACGTTTCATCTCAGATTTTTTGA 1698 0.4158 MLLLLLVTGVEWKVNLDNGVQQDSHEFLTLLLSLLERCLSYSKVPKARTIVQDLFRGSVSHMTTCSQCGRVSEASSKMEDFYELELNVKGLRSLDESLDDLPHFMGVDEGLNCFHNEALRLPSPLLVISARKLLSYVGIMEKHLDKQYGGGPTLSHCDCCWDCLIDGAHTVVSADTYWERQESIKQLARDILDGNCPDGKYYISGPWLQQWWKRKVLDAPSEADAGPTASISFPHEQLTPEQDAGAKWVLVPESFWPFLYEDAVSVKPDDLGCPTFPSDSKLCSQCSNELSEVACSENSLSYIVTSLCYSVMFCILLQGGLTIISGNDWKFSCEEWGGTETKGVSATIESINYSETVWTASCLETPICEDQLNICDKVNSDCGTREIVIKTCPEICESCIGERKSCELMQKLNYCNENICVILVRGKEVPRAILEASEGSIETDWRVSKRSRKSKIGSSISLKVSASTSLYQLKMMIWESFGENQILQKGDRTIDIDDECATLADLNIFTGDQIIVRDSEIHENRDIAGNLCDMDELCDEKMDMQHSEEGFRGALLTANVSSQIF 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0783 565 ProSiteProfiles DUSP domain profile. 175 281 IPR006615 GO:0004843
Glsi10g0783 565 CDD Ubl_USP48 452 556 IPR044743 GO:0004197|GO:0004843|GO:0016579
Glsi10g0783 565 SUPERFAMILY Cysteine proteinases 17 115 IPR038765 -
Glsi10g0783 565 Pfam Ubiquitin carboxyl-terminal hydrolase 14 147 IPR001394 GO:0004843|GO:0016579
Glsi10g0783 565 Gene3D Cysteine proteinases 6 118 - -
Glsi10g0783 565 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 16 108 - -
Glsi10g0783 565 SUPERFAMILY Ubiquitin-like 457 518 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0783 Glsi-ChrGlsi10 5013905 5022144 Wgd