Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0776 ATGGAGGCCGCCATGGACGACCAGGAGAATCAAAACTATGCTCCCCCGCCTCTACCTGTGGCAGAATCTCGGTCTCAGCCTCAATCGCAAGAAGGGGACGGGGAGGAAGAAGACGATTCCAAGAAGGAAGAAGACGAGTTGATTACAAAGGCTCAGAAGTTGATGGAGAAGATCACTTCTGCGCCTGATAACCCTAAACCTACCGCCCTCCATGCCCTTGCCTCCATTCTTGAAACCCAAGAGTTCCGATACATGGAAGAGAATGGTCATTCCTCCTCCAGTAATGCCCGTGCTTCTCATAATGTTGGGCGCCTTGGGAGCTTAATCCGGGAAAATGATGAATTCTTTGAGTTGATATCATCCAAGTATCTGTCAGAAACAAGATACACAACTTCCGTTCAGGCTGCTGCCATCAGGCTTCTCCTGTGCTGTTCGCTAACTTGGATTTATCCTCATGTTTTTGAAGAATCTGTCCTGGATAACATTAAAGCTTGGGTGATGGACGAGAATAATAGATCTTCTGTGGAAGAACAGAACCTGAAGTATAATCCAGGGAAAAGGGAAGCGTCAGATTCTGAAATGTTGAAAACTTATTCTACGGGACTTCTTGCTGTGTGTTTGGCTGGTGGAGGTCAAGTAGTGGAAGATGTATTGACATCTGGTTTGTCAGCCAAGCTTATGCGATATCTTCGTTTTCGTGTGCTTGGGGAGACTAGTAGCATCCAGAAAGATACTAGTCATTTAACTGAGAGTAGACATGCTTCTACCAATACTTCAACCAGGGGTAGGGATGATGGCCGTGGTAGATTTCGCCAGGTTCTGGAATCAAGTCATTTAGATGATACAAGGGTGATTGATGAGAGATCTTTAGATGACCGAACTCTTGAAAGGGATCAAGATAGAAGCATTACTGGACAAACTTGCCAAGAAGATTCTTGGGTTGATGGTAAGCCTCCTGATGGGCTGTGTGAAGGTGCTGATATTGGTAAGGTGGATACTGATGGGGAAGATAGATGGCACAGTAGAGATATGCGTGATGGAAGGATAAAATTTGGTGATCATGATGACAATACAAGAGATGACTCTTCAAGACGGCGTGCAAACCGTGGATGGGCTAGATCCAGAGGGAAGGGAAGGTTTAATGAAGGGACCGTAGAAAGTGAACCAATTTTGTCATCTCCCAGCTCTGGTAGTCAATTAGGACAGGGAAGGAATGTTAGAGATAGGAACATGTTAAGGAGTGTTGATGTTAGGAGGGTGCCTGATTCAAAGAAGACTCTTGCCAGGATAACGTCTGAAGCTTCTGTTGTGGAAAGAGAGGATAATGATGATTGTTTTCAGGAGTGCTGTATTGGAAGTAAAGATATCTTTGATCTTGTTAAGAAAGCAGTCCGAGCAGCAGAAGCTGAAGCCAGAGCTGCCAATGCACCTGAAGAAGCAGTCAAAGCAGCTGGTGATGCTGCTGCTGAACTTGTTAAAACTGCAGCTTTGGAGGAATTCAAATCTACTAATGATGAAGAAGTCGCTGTTTTGGCTGCTTCTAGAGCTGCATCAACTGTTATTGATGCTGCATCTGCAATTGAAGTTTCAAGGAACTCGAACAGCATCAATGCTGAGACAGAGAATGCATGTAGCAGGGAAACAGAATCTACTGAGGATGTTGACGATTACTTCATCCCAGATACTCAATCGCTTGCACAGCTGAGGGAAAAATATTGCATTCAGTGCCTTGAGATACTTGGAGAATATGTTGAAGTTCTTGGCCCTGTATTGCATGAGAAGGGTGTAGATGTTTGTCTTGCACTTCTGCATCAGAACTCTAAACATCAAGAGGCATCCAAGATTGCCCTACTGCTCCCTGATGTCATGAAGCTGATCTGTGCTTTGGCTGCTCATCGGAAATTTGCTGCGCTGTTTGTGGACCGTGGGGGCATGCAAAAATTGCTTGCCGTCCCAAGAATGGCTCAAACCTTCTTTGGCCTTTCTTCTTGCCTATTTACTATCGGTTCTCTGCAGGGAATCATGGAACGGGTATGTGCTCTCCCATCTGATGTTGTCTATCATGTGGTTGAGTTGGCGCTCCAACTCCTTGAGTGCTCCCAAGACCAAGCCCGGAAAAATGCAGCATTGTTTTTCGCTGCTGCATTTGTCTTCAGGGCAGTTCTTGATGCTTTTGATGCCCAGGAAGGATTACAAAAGTTACTGGGCCTTCTAAATGATGCTGCTTCTGTAAGGTCAGGAGTGAATTCCGGGGCCTTGGGACTATCAAACTCTGGATCACTTAGAAATGATCGATCACCTGCAGAAGTATTGACATCATCTGAGAAGCAGATAGCCTACCACACTTGTGTTGCTTTGCGGCAATATTTTAGAGCGCATCTCCTTTTACTGGTGGATTCCATTCGTCCAAATAAAAGCAATCGTAGTGCTGCTAGGAATATTCCAAGTGTGAGGGCAGTGTACAAGCCACTTGACATAAGTAGTGAGGCAATCGATGCAGTATTCCTGCAGTTACAGAAAGATCGGAAGCTTGGTCCTGCATTTGTGAGAACGCGTTGGCCAGCAGTTGAGAAGTTCTTGGTGACCAATGGACATGTAATTATGTTAGAATTGTGTCAGGCCCCACCTGTGGAACGATATCTGCATGATTTGCTTCAATATGCATTAGGTGTTCTACACATTGTTACATTAGTACCGAGCAGTCGCAGGATGATTGTGAATGCAACATTAAGCAATAATCGTGTTGGCATAGCAGTCATTTTGGATGCAGCAAATATTGCTCCTAGTCATGTTGACCCTGAGATTATTCAGCCTGCATTAAATGTGTTAGTCAATCTTGTTTGTCCTCCACCTTCAATCAGCAATAAACCACCTTTGATGACGCAAGGTCAGCAGTCAGCTTCTGCCCAGAGCACAAATGTTCCTCCGACGGAGACTCGAGATAGAACTAATGAACGTTATATTTCAGATCGAGCTGTTCACGTTTCCAACCAGACTGATCCAAGGGAGCGGAATGCAGAATCTGGTGTTGTAGAACGAGGTAGTGCTGCAGTAGCTAGTACACAGACTGTTAGTAGCAACCCACAAACTCCTGTTGCCACTACACCTTCTGGATTGGTTGGAGACCGTAGAATATCTCTGGGTGCTGGGGCAGGTTGTGCTGGCCTAGCTGCACAACTTGAACAAGGATATCGTCAGGCAAGAGAGGCTGTCCGCTCTAATAATGGAATAAAAGTCTTGCTGCATCTCCTCCAACCACGCATATATTCACCTCCTGCTGCTTTAGACTGCCTTCGTGCTCTAGCATGTCGAGTCCTGCTCGGTTTAGCCAGAGATGATACTATTGCACACATATTGACAAAGCTTCAGGTTGGGAAAAAGCTGTCAGAACTAATTAGAGATTCTAGCAGCCAAACACTTGGAACAGAGCAGGGTAGGTGGCAAGCTGAACTTTCCCAAGTTGCAATTGAGCTAATTGGGATTGTGACCAACTCTGGGCGTGCGAGTACATTAGCAGCTACCGATGCAGCTACTCCTACATTAAGGCGCATTGAAAGAGCAGCAATAGCTGCTGCCACTCCTATTACTTACCATTCAAGGGAACTTTTGCTCTTAATTCATGAACACCTACAGGCATCTGGATTGTCACAAACTGCTTCCGCATTGCTTAAAGAGGCTCAGTTGACTCCTTTGCCATCGTTGGTTGCTCCATCATCTCTTGCTCAAGCAGCCATCACACAGGAAGCTCCTTCAATACAACTTCAGTGGCCCTCTGGTCGAACTCCTTCTGGATTTCTCACTAACAAATTAAAGCTTAATGCAAGGGATGAGGATTTTAGCATGAAGAGTGATTCAGCCATCTCTTCTAAGAAAAAAACACTGACTTTCTCATCTTCTTTTGGCTCACATTCAAGACATCAGCCCGTTGATTCTCAGCAGTCATCAGTCAGGAAAGGTTTGAGTGCTGGGAAGGAGTCTTCTGAGACTACTAGTTCATTAGAGACCTCATCAGAGCCTTCAATGAAACATAATATTGATGCAGAGTGTCAGTATAAGACTCCACTCATCTTGCCTATGAAACGGAAGTCAACTGATGCAAAGGATATAGGAGTGTTGTCGTCTGGAAAGCGACTAAATGCTGGTGATCAAGGACTTCGATCTCCTATTTGTCCAACTCCGAGTACAATCCGTAAAAGCAACCTGCAGACTGATGCTATTGGGTTTTTTACACCAAGTTCCAACATGAGAAGTCAACAAGGACGTTGTACAGTTGACTTTGTGGATGACGGTCAATTCAGTAGCTCAAATCTTGGTCAGGTGACAGCATCCTCCCAAATACTGAATGATCTTCAGCTCAACAATCCAGAGCGTTTAACATTAGACTCTCTAGTGGTTCAGTATTTGAAGCATCAGCATCGCCAGTGCCCAGCTCCTATTACCACTCTTCCTCCACTATCTCTTTTACACCCACATGTTTGTCCTGAACCAAAGCGAAGTCTCGATGCCCCATCTAATGTGACGGCTCGGCTTGGTACACGTGAATTTAAATATATGTATGGTGGAGTGCATGGGAATCGTAGAGATCGTCAGTTTGTTTACAGCCGATTCAGGCCATGGCGCACATGTCGGGATGATGCTGGTGCCTTATTGACGTGCGTTACATTTCTCGGTGACTCTTCTCATATTGCTGTTGGGAGCCACAATGGAGAGCTCAAAATTTTTGATTCCAACAGCAATAATGTGGTGGAGAGCTTCACAGGCCACCAGTATCCTTTGACTCTTGTCCAATCATTTGTTTCTGGTGAGACCCAGCTGTTGCTTTCTTCAAGCTCCCAAGATGTGAGATTGTGGGATGCATCATCAATTTCAATTGGTCCTACCCATTCATTTGAAGGGTGCAAGGCTGCCAGATTTAGCAATTATGGCAGTGTTTTTGCAGCCTTGTCATCAGAATCTGCACGACGGGAAATTCTCTTGTATGATATTCAAACCAGTCAATTAGAGTCTAAACTTTCAGATACATTTGCAAGTTCTACAGGCAGGGGTCATGTTTATTCCCTAATTCATTTTAGCCCTTCTGACTCAATGCTTCTCTGGAATGGTGTCTTATGGGATCGGCGGGTCTCTGGGCCTGTTCATCGCTTTGAACAGTTCACAGACTATGGGGGTGGAGGTTTTCATCCTGCTGGAAATGAGGTTATTATAAACTCGGAAGTCTGGGATTTGCGCAAATTCAGACTGCTGCGCAGTGTACCTTCATTAGATCAAACAGCAATAACATTCAATGCCCGTGGTGATGTAATTTATGCAATCCTAAAGAGAAATATTGAGGATGTAATGTCAGCGGTCCACACACGTCGTGTCAAGCATCCTCTTTTTTCGGCTTTTCGCACAGTGGATGCAGTCAATTACTCTGATATTGCCACTATTCCAGTAGATCGCTGTGTGCTTGATTTTGCTACTGAGCCAACTGATTCGTTTGTTGGGTTAATTACAATGGATGATCAAGATGAAATGTTTGCATCAGCCAGGATGTATGAAATTGGTCGTCGGAGACCTACTGATGATGATTCTGATCCCGATGATGCCGAAAGTGAGGAGGAAGATGAGGACGATGACGACGCTGATGTGGATCCTCTATTAGGCCCTGGTCTTGGTGTGGAAAGTGAGAGTGATGCAGATGATATGAGCAATGATGAAGACGACGACGACGATGATAGTGTAAGTGATCTTGATGATGATGAAGATGGAGATTTCATTATGGATGATTTAGACTTCGATGGAGGAGCTGGAATATTGGAGATTGTGACAGAAGGTGACGAGGATGATGATGATAGTCAAGTACTTGAATCTTTAAGTAGTGGCGAAGAGGATTTTATGGGTAATGGCTTTGGTTATTAA 5901 0.4477 MEAAMDDQENQNYAPPPLPVAESRSQPQSQEGDGEEEDDSKKEEDELITKAQKLMEKITSAPDNPKPTALHALASILETQEFRYMEENGHSSSSNARASHNVGRLGSLIRENDEFFELISSKYLSETRYTTSVQAAAIRLLLCCSLTWIYPHVFEESVLDNIKAWVMDENNRSSVEEQNLKYNPGKREASDSEMLKTYSTGLLAVCLAGGGQVVEDVLTSGLSAKLMRYLRFRVLGETSSIQKDTSHLTESRHASTNTSTRGRDDGRGRFRQVLESSHLDDTRVIDERSLDDRTLERDQDRSITGQTCQEDSWVDGKPPDGLCEGADIGKVDTDGEDRWHSRDMRDGRIKFGDHDDNTRDDSSRRRANRGWARSRGKGRFNEGTVESEPILSSPSSGSQLGQGRNVRDRNMLRSVDVRRVPDSKKTLARITSEASVVEREDNDDCFQECCIGSKDIFDLVKKAVRAAEAEARAANAPEEAVKAAGDAAAELVKTAALEEFKSTNDEEVAVLAASRAASTVIDAASAIEVSRNSNSINAETENACSRETESTEDVDDYFIPDTQSLAQLREKYCIQCLEILGEYVEVLGPVLHEKGVDVCLALLHQNSKHQEASKIALLLPDVMKLICALAAHRKFAALFVDRGGMQKLLAVPRMAQTFFGLSSCLFTIGSLQGIMERVCALPSDVVYHVVELALQLLECSQDQARKNAALFFAAAFVFRAVLDAFDAQEGLQKLLGLLNDAASVRSGVNSGALGLSNSGSLRNDRSPAEVLTSSEKQIAYHTCVALRQYFRAHLLLLVDSIRPNKSNRSAARNIPSVRAVYKPLDISSEAIDAVFLQLQKDRKLGPAFVRTRWPAVEKFLVTNGHVIMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSRRMIVNATLSNNRVGIAVILDAANIAPSHVDPEIIQPALNVLVNLVCPPPSISNKPPLMTQGQQSASAQSTNVPPTETRDRTNERYISDRAVHVSNQTDPRERNAESGVVERGSAAVASTQTVSSNPQTPVATTPSGLVGDRRISLGAGAGCAGLAAQLEQGYRQAREAVRSNNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLARDDTIAHILTKLQVGKKLSELIRDSSSQTLGTEQGRWQAELSQVAIELIGIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHSRELLLLIHEHLQASGLSQTASALLKEAQLTPLPSLVAPSSLAQAAITQEAPSIQLQWPSGRTPSGFLTNKLKLNARDEDFSMKSDSAISSKKKTLTFSSSFGSHSRHQPVDSQQSSVRKGLSAGKESSETTSSLETSSEPSMKHNIDAECQYKTPLILPMKRKSTDAKDIGVLSSGKRLNAGDQGLRSPICPTPSTIRKSNLQTDAIGFFTPSSNMRSQQGRCTVDFVDDGQFSSSNLGQVTASSQILNDLQLNNPERLTLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHVCPEPKRSLDAPSNVTARLGTREFKYMYGGVHGNRRDRQFVYSRFRPWRTCRDDAGALLTCVTFLGDSSHIAVGSHNGELKIFDSNSNNVVESFTGHQYPLTLVQSFVSGETQLLLSSSSQDVRLWDASSISIGPTHSFEGCKAARFSNYGSVFAALSSESARREILLYDIQTSQLESKLSDTFASSTGRGHVYSLIHFSPSDSMLLWNGVLWDRRVSGPVHRFEQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTAITFNARGDVIYAILKRNIEDVMSAVHTRRVKHPLFSAFRTVDAVNYSDIATIPVDRCVLDFATEPTDSFVGLITMDDQDEMFASARMYEIGRRRPTDDDSDPDDAESEEEDEDDDDADVDPLLGPGLGVESESDADDMSNDEDDDDDDSVSDLDDDEDGDFIMDDLDFDGGAGILEIVTEGDEDDDDSQVLESLSSGEEDFMGNGFGY 1966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0776 1966 MobiDBLite consensus disorder prediction 1 47 - -
Glsi10g0776 1966 Gene3D - 1536 1860 IPR015943 GO:0005515
Glsi10g0776 1966 MobiDBLite consensus disorder prediction 327 368 - -
Glsi10g0776 1966 MobiDBLite consensus disorder prediction 1859 1878 - -
Glsi10g0776 1966 MobiDBLite consensus disorder prediction 1892 1923 - -
Glsi10g0776 1966 MobiDBLite consensus disorder prediction 957 978 - -
Glsi10g0776 1966 MobiDBLite consensus disorder prediction 243 268 - -
Glsi10g0776 1966 SMART Lish 1198 1230 IPR006594 GO:0005515
Glsi10g0776 1966 MobiDBLite consensus disorder prediction 1846 1966 - -
Glsi10g0776 1966 FunFam DDB1-and CUL4-associated factor homolog 1 1533 1860 - -
Glsi10g0776 1966 SUPERFAMILY WD40 repeat-like 1550 1771 IPR036322 GO:0005515
Glsi10g0776 1966 SMART WD40_4 1578 1618 IPR001680 GO:0005515
Glsi10g0776 1966 SMART WD40_4 1535 1575 IPR001680 GO:0005515
Glsi10g0776 1966 SMART WD40_4 1623 1661 IPR001680 GO:0005515
Glsi10g0776 1966 MobiDBLite consensus disorder prediction 1015 1036 - -
Glsi10g0776 1966 ProSiteProfiles LIS1 homology (LisH) motif profile. 1198 1230 IPR006594 GO:0005515
Glsi10g0776 1966 MobiDBLite consensus disorder prediction 1297 1343 - -
Glsi10g0776 1966 PANTHER VPRBP PROTEIN-RELATED 37 1962 IPR033270 GO:0016567
Glsi10g0776 1966 MobiDBLite consensus disorder prediction 386 405 - -
Glsi10g0776 1966 MobiDBLite consensus disorder prediction 1936 1951 - -
Glsi10g0776 1966 SUPERFAMILY ARM repeat 589 1138 IPR016024 -
Glsi10g0776 1966 MobiDBLite consensus disorder prediction 955 1038 - -
Glsi10g0776 1966 MobiDBLite consensus disorder prediction 1297 1345 - -
Glsi10g0776 1966 MobiDBLite consensus disorder prediction 291 406 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0776 1562 1768 U-box Gene Family AT2G33340 24.554 3.02e-06 50.1