Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0772 ATGTCAATAACGCAAACCAGAGCACCACTTCCATTTCTAGTTAGAAGACGTTCCAGTGGTGAAATCAGGAACTTGGCCTCGATTTCTGGGAGCCTCTTACCAGCATTTGGCACCCATATTGTTGATGATGGGTACTTAAACCTCAGAAAATATGTCATCGCTCCATATGATCGTAGATATCGGTTGTGGCAGACATTCCTGATTGCATTGGTAGTATACTCTGCATGGGCATCCCCTTTTGAGCTAGCTTTCAAAAGAGGGGCAACTAGGTGGCTGTTGCCCGTTGACCTAATCGTCGATGCCTTCTTTGCTATTGATATAATCCTAACTTTCTTTGTGGCATACTTGGATACCTCAACCTATCTCCTCGTTGATGACCATAAGAAGATAGCTATCAGGTACTTCAAAAAGTTACATTTTCCCATGGACGTAGCCGCAACTCTGCCATTGCAGCAGATATCCCAAATTCTGACAGCCAAAACATACAAAAGCGACGTCTTTGGTTTCCTAAATATGCTTAGACTTTGGCGATTAAGGCGTGTGAGCCAACTTTTTACAAGGCTAGAGAAAGATGTACGAATTAGCTACTCGGCAACAAGATTTTGTAAACTTATATGCGTTACGCTATTTGCAGTGCACTTCGCAGGCTGCATGTATTACTGGTTGGCTGCCCACCACAAAAACCCAGATAACACATGGATCGGGGAAAATATAAACGATTTTAAACACAGAAGCATCTGGCTGGGCTACACCTATTCCATGTACTGGTCTATTGTCACCCTTACCACTGTTGGCTATGGAGATTTGCACGCTGTGAATACTGGGGAGAAAATTTTCAATATCTTATATATGCTGTTTAACATAGGCCTCACAGCATATATAATCGGAAACATGACAAATCTGGTTGTCCATAGCACTGTCCGAACCTTTGCCATGAGGGATGCCATCAACCAAATACTAAAGTATGTAAGCAAAAATAGACTCCCAGAAGGCTTGAAAGAGCAAATGCTAGCACACATGCAATTGAAGTTTAAAACAGCAGAGTTGCAGCAAGAAGAAGTGCTACAGGACCTTCCCAAAGCAATTAGATCCAGTATTGCACAGCATCTTTTCCATAATATAGTTGAAAATGCATATTTATTTAAGGGAGTCTCTGATGATTTTATCACCCAGCTGGTGTCAGAAATGAAAGCTGAATATTACCCGCCTAAGGTTGACATTATCTTGCAAAATGAGATGCCATCATATTTCTACATTTTGGTATCTGGAGCAGTGGATGTGTTAATATCCAAGAACGGAACCGAACAGCTTTTGTTGAAACTAGAATCTGGAAATGTGGCGGGAGAAATAGGGGTGATGTTTAATATCCCCCAACCTTTTACAGTGAGATGTAGGAGGCTTTCTCAATTCATACGAATCAGTCATCATCATTTCAAGCAGATGGTCCAACCATACAGTGACGATGGGAAGGCAATTATCACCAACTTCATTCAGTCCTTGAAGAGCTTAAAAAACAAGGTGCTAGAAGAAATACCATATCTAACAGAATTGTTGGGTGACCTGCATGATGAGCATCTAACAAAAGAAGAGGGCATAGATGATGAAGTTTCAAGTTATCACGAAGACAATCCGTATAAAGAAGGAAGAACAGGAAATTTTGATCCACTTTCAAGCCTAGTCCACACCAGAGTGAAAATCCATGGACATCATCCTAAGGAAAACAGAATGGGAAATCAAACAACACAAAAACTCGTACTTCTCCCAAATACGATAGAAGATCTTTTCAAATTAGCAGAACAGCATAAGCAGCATTTAGAAATTGCTCCTTCTCTTCATCTAAAGCTCTCTTTCTCTCAATAG 1860 0.4081 MSITQTRAPLPFLVRRRSSGEIRNLASISGSLLPAFGTHIVDDGYLNLRKYVIAPYDRRYRLWQTFLIALVVYSAWASPFELAFKRGATRWLLPVDLIVDAFFAIDIILTFFVAYLDTSTYLLVDDHKKIAIRYFKKLHFPMDVAATLPLQQISQILTAKTYKSDVFGFLNMLRLWRLRRVSQLFTRLEKDVRISYSATRFCKLICVTLFAVHFAGCMYYWLAAHHKNPDNTWIGENINDFKHRSIWLGYTYSMYWSIVTLTTVGYGDLHAVNTGEKIFNILYMLFNIGLTAYIIGNMTNLVVHSTVRTFAMRDAINQILKYVSKNRLPEGLKEQMLAHMQLKFKTAELQQEEVLQDLPKAIRSSIAQHLFHNIVENAYLFKGVSDDFITQLVSEMKAEYYPPKVDIILQNEMPSYFYILVSGAVDVLISKNGTEQLLLKLESGNVAGEIGVMFNIPQPFTVRCRRLSQFIRISHHHFKQMVQPYSDDGKAIITNFIQSLKSLKNKVLEEIPYLTELLGDLHDEHLTKEEGIDDEVSSYHEDNPYKEGRTGNFDPLSSLVHTRVKIHGHHPKENRMGNQTTQKLVLLPNTIEDLFKLAEQHKQHLEIAPSLHLKLSFSQ 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0772 619 Pfam Ion transport protein 61 308 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Glsi10g0772 619 ProSiteProfiles cAMP/cGMP binding motif profile. 380 499 IPR000595 -
Glsi10g0772 619 Gene3D - 61 304 - -
Glsi10g0772 619 Pfam Cyclic nucleotide-binding domain 400 483 IPR000595 -
Glsi10g0772 619 Gene3D Jelly Rolls 370 511 IPR014710 -
Glsi10g0772 619 PRINTS EAG/ELK/ERG potassium channel family signature 96 106 IPR003938 GO:0005249|GO:0006813|GO:0016020
Glsi10g0772 619 PRINTS EAG/ELK/ERG potassium channel family signature 294 303 IPR003938 GO:0005249|GO:0006813|GO:0016020
Glsi10g0772 619 PRINTS EAG/ELK/ERG potassium channel family signature 250 267 IPR003938 GO:0005249|GO:0006813|GO:0016020
Glsi10g0772 619 PRINTS EAG/ELK/ERG potassium channel family signature 107 116 IPR003938 GO:0005249|GO:0006813|GO:0016020
Glsi10g0772 619 PRINTS EAG/ELK/ERG potassium channel family signature 276 287 IPR003938 GO:0005249|GO:0006813|GO:0016020
Glsi10g0772 619 PANTHER POTASSIUM CHANNEL AKT1 25 517 IPR045319 GO:0005249|GO:0006813
Glsi10g0772 619 FunFam Potassium channel KAT2 368 504 - -
Glsi10g0772 619 SMART cnmp_10 380 497 IPR000595 -
Glsi10g0772 619 SUPERFAMILY Voltage-gated potassium channels 55 302 - -
Glsi10g0772 619 SUPERFAMILY cAMP-binding domain-like 309 498 IPR018490 -
Glsi10g0772 619 FunFam Potassium channel KAT3 62 304 - -
Glsi10g0772 619 CDD CAP_ED 380 493 IPR000595 -
Glsi10g0772 619 Gene3D Helix hairpin bin 308 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0772 Glsi-ChrGlsi10 4914858 4920352 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0772 2 600 Ion Channels AT4G32650 58.592 0.0 691