Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0762 ATGATGATAATATGCTTTCTTTCCTTATTGATGTTCATTGTGGTTAAGTTGTTTGAACCTACGAAGATGGGAACTCGGATGAAAGAAGATGAAAGAATTGAAAAAGTAATTCGCAGCCTTTTGAAACTTCCCGAAAATCGGAGATGTATCAATTGCAATAGTTTGGGACCACAATATGTTTGCACAACTTTCTGGACATTTGTCTGTACAAACTGCAGTGGAATACAACGAGAATTTAACCATAGAGTAAAATCAGTATCGATGGCCAAATTTACTGCAGAAGAAGTCAGTACTCTTCAAGCATGCGGCAATGAGGTGTGTGCAATGTTTGTTGGTGAAGCACTTATTTGTAACATATACAGACTCCGAGAATTCATCAAGCATGTCTATGTCGATAGAAAATTCACCGGGGAAAGGAGTCATGCGAATCTCCCTAGACTAAGATTGAATGACAAGGAGGTCTCCAGCGAACGCAGGAAGAACAATGCAAATTGTATTGGGTCCAAAAGCCCACTTTTTGAAGATAAAAATGAAGCACGTTACGGTGAAAGATCCAGTTCTAGTTTAAGAACTGAGGGCGGGAGTTTCAAATATTACTACGATGAAAGAAGAAGTCCTAGATATGCATCGAGGCATGGAGGCCGAAGGACTCCTATTAAACTTGAGGTTGTTGATGATAGGTTCCGAGAACACGAATTCAGAAGTCGCAGGCTCTCAAATTTAGAATCTAAGAAGGTTGCAGCTGCCAGTGGCGAGGGCTCCGTTGAGGGAAATTCAGCAGAAAAACATATCACTTCTCAGGTCTCTGAAGCTGCGGCTGCACCAGAAACACAATCAAATGCAAGTGAGTACTGGGCCCCATTTGATGATTTCAGAGCAGAGGAGGCTATTCAAACTCCAACCACAAATAACTTACAATCTCCTTCAAAAGCAGAGAAGGCTCCTCAAACTCCAACCACAAATACCTTAAAATCTTCTTCAAAAGCAGAGAAGGCTCCTCAAACTCCAACCACAAATACCTTAAAATCTCCTTCAAAAGCAGAGAAGGCTCCTCAAACTCCAGCCACAAATACCTTAAAATCTTCTACACCTCAAACAACAACTGCAAATGCTATAGAATTTTTACTTTCTGAATTATCTGGTCCCTTGGTTGCAACTACTGGTGGCATATCTGAAGTCTACAGTGCTAATAATGATCCTTCAACTGCAACCATAGAAAATATGTCAGCTGGTGGAGATTTGCCACCTACCTCAGTAGACCGGATAACTTCATCACCCAACACTGGTGCTTCGTCAGTTACATCAACCACTGATAACCCCCGAGCAGTTTGTAGCTCTACGACGAAAATGATGAGTCCGCCAGTCAGAGCTGTGTCTTCGAATAATCAGCCAACGGTTTCTCCTAATAAACAAGACCTGTTAAGTGCTTTTACTGAACTATCTTCTCAAGACACCAGATCTGATGTCGGATCTCAGCCTTGTACAGTGGAAACCAAGTCAAGTGGAAGAAAGGAACTTCCAGTGGACCTTTTTACTACAAACTACTTATCCGGGCCTGCGCCACTAGCAGGATGGCAGAATGTTCAACCTCATGACATGGGATTCGGCATGCAGTATTATCCTAATACAGCGCCTCCCTCAGCATTTCCAGCTGCAGCAAAGTACAGGAATCCATTTGATGTAACTGTGGGGAGAACTCAAGTCCATGCCTCACCGTTTCCTACTACAGCATCTTTGCAAAGTGTACGACCTGCCATGTCAACTGGAACAGGATTAGTGCGTGCTTCGAGCCTTGGGTCTTTAGGGTCGATGGTGCCTCAATCCCCAAGTTATGCATCTCCAATTCCTCCACAATCTCCTTTTGCTTCTGGATTCCCTCCTGGTATTTCCCTTGTAAATCCTATTCTTGTTGATCTTCTGGATTCTTTGTTCATTGTGAAGTCACTGGGTAATAAGATACGAAGCATGCCGCCAAGTTCTTTTCATTTACACAAGCATTTTCATTTTCTGAAGCTCATAGTGGGGGTTAAGGAAGAGAACCATAATGTGATAACAGAAGGTTATAAGATGAAACAGGCTCCTTGCAAAACTAAATTCAGAACTTCAACTGAATACTGGAATGGGGGTTGTTTTCAGCAGACAGAACCACAAGTACCTCGAAGAGTTGGCAGCTTCAATAGTGACAGAACTGTTCAGCGGGCAGCTATGGGATTTATGGCTCCCAGCACTTCAAATTCTTTTTCAAATAAAGGAGGCAATCCATTTGGATAG 2271 0.4258 MMIICFLSLLMFIVVKLFEPTKMGTRMKEDERIEKVIRSLLKLPENRRCINCNSLGPQYVCTTFWTFVCTNCSGIQREFNHRVKSVSMAKFTAEEVSTLQACGNEVCAMFVGEALICNIYRLREFIKHVYVDRKFTGERSHANLPRLRLNDKEVSSERRKNNANCIGSKSPLFEDKNEARYGERSSSSLRTEGGSFKYYYDERRSPRYASRHGGRRTPIKLEVVDDRFREHEFRSRRLSNLESKKVAAASGEGSVEGNSAEKHITSQVSEAAAAPETQSNASEYWAPFDDFRAEEAIQTPTTNNLQSPSKAEKAPQTPTTNTLKSSSKAEKAPQTPTTNTLKSPSKAEKAPQTPATNTLKSSTPQTTTANAIEFLLSELSGPLVATTGGISEVYSANNDPSTATIENMSAGGDLPPTSVDRITSSPNTGASSVTSTTDNPRAVCSSTTKMMSPPVRAVSSNNQPTVSPNKQDLLSAFTELSSQDTRSDVGSQPCTVETKSSGRKELPVDLFTTNYLSGPAPLAGWQNVQPHDMGFGMQYYPNTAPPSAFPAAAKYRNPFDVTVGRTQVHASPFPTTASLQSVRPAMSTGTGLVRASSLGSLGSMVPQSPSYASPIPPQSPFASGFPPGISLVNPILVDLLDSLFIVKSLGNKIRSMPPSSFHLHKHFHFLKLIVGVKEENHNVITEGYKMKQAPCKTKFRTSTEYWNGGCFQQTEPQVPRRVGSFNSDRTVQRAAMGFMAPSTSNSFSNKGGNPFG 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0762 756 SUPERFAMILY ArfGap/RecO-like zinc finger 33 136 IPR037278 -
Glsi10g0762 756 CDD ArfGap_AGFG 34 135 - -
Glsi10g0762 756 SMART arf_gap_3 34 143 IPR001164 GO:0005096
Glsi10g0762 756 Gene3D Arf GTPase activating protein 23 145 IPR038508 -
Glsi10g0762 756 Pfam Putative GTPase activating protein for Arf 35 136 IPR001164 GO:0005096
Glsi10g0762 756 MobiDBLite consensus disorder prediction 481 501 - -
Glsi10g0762 756 PRINTS HIV Rev interacting protein signature 46 65 IPR001164 GO:0005096
Glsi10g0762 756 PRINTS HIV Rev interacting protein signature 65 82 IPR001164 GO:0005096
Glsi10g0762 756 PRINTS HIV Rev interacting protein signature 83 104 IPR001164 GO:0005096
Glsi10g0762 756 ProSiteProfiles ARF GTPase-activating proteins domain profile. 34 110 IPR001164 GO:0005096
Glsi10g0762 756 MobiDBLite consensus disorder prediction 241 280 - -
Glsi10g0762 756 MobiDBLite consensus disorder prediction 300 365 - -
Glsi10g0762 756 PANTHER ARFGAP/RECO-RELATED 23 756 IPR044820 GO:0005096
Glsi10g0762 756 MobiDBLite consensus disorder prediction 481 499 - -
Glsi10g0762 756 MobiDBLite consensus disorder prediction 259 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0762 Glsi-ChrGlsi10 4873430 4877495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0762 37 116 C2H2 Transcription Factor Family AT4G05330 30.120 1.47e-08 55.5