Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0759 ATGCCTGTCAAATCGGCGCAATCATCATTTCGGGATCGATCACAGGAATTCCAAAGCATAGCGGAGAGGCTAAAGAAATCAGTGTCATCAGGATCAGGGTCTAATGGGCCAAGTAGTAGTTCAAGATCGGAGGAGCAGCGATCTGCGGTCGCAATTCAATCAGAGTTCAATAGAAGGGCTTCCAAGATTGGATATGGAATACATCAGACATCACAGAAACTTGCTAAGCTGGCCAAGTTGGCCAAAAGGACTTCGGTTTTTGATGATCCCACCATGGAAATCCAAGAGCTCACAGCATTTATTAAGCAAGATATTACTGCACTGAACTCTGCCGTTGTTGATCTTCAGCTACTCTGCAACACCAGAAATGAAAGTGGCAATATCTCTAGTGATACAACTAGTCATTCAACCACAGTTGTTGATGACCTAAAAACTCGATTGATGAGCACCACAAAAGAGTTTAAAGAAGTCCTCACCATGCGAACAGAGAACTTGAAAGTACACGAGAACAGAAGACAATTGTTTTCTTCTACCGCTTCTAAGGATACTGCAAATCCTTTTGTCCGTCAACGTCCTTTGGCTGCAAGGTCGGCTGCTAGTGCTTCTAATGCCCCTGCTCCCCCGTGGGCTAGTGGGTCACCATCTTCATCTCAGTTGTTTCCTAAGAAGCAGATGGAAGGAGAGAGTCAACCATTGCTGCAGCAACAGCAACAGCAACAGCAGCAGCAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGCAGCAATTGGTTCCGTTGCAAGACACTTACATGCAAAGCAGAGCTGAAGCTCTTCAGAATGTTGAGTCCACTATTCATGAGTTAAGCAACATCTTTAATCAACTGGCGACACTCGTTTCCCAACAAGGAGAGATTGCCATCAGGATTGACGAGAACATGGATGATACGTTGGCAAACGTAGAGGGGGCACAGGGAGCTTTGTTAAAATATCTGAACAGCATATCGTCTAATAGGTGGCTGATGATCAAGATATTCTTTGTATTAATATTTTTCCTCATGGTTTTCCTATTTTTTGTGGCGTAG 1062 0.4473 MPVKSAQSSFRDRSQEFQSIAERLKKSVSSGSGSNGPSSSSRSEEQRSAVAIQSEFNRRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTAFIKQDITALNSAVVDLQLLCNTRNESGNISSDTTSHSTTVVDDLKTRLMSTTKEFKEVLTMRTENLKVHENRRQLFSSTASKDTANPFVRQRPLAARSAASASNAPAPPWASGSPSSSQLFPKKQMEGESQPLLQQQQQQQQQQQQQQQQQQQQQQLVPLQDTYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEIAIRIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0759 353 Gene3D - 51 316 - -
Glsi10g0759 353 PANTHER SYNTAXIN 52 345 IPR045242 -
Glsi10g0759 353 MobiDBLite consensus disorder prediction 204 239 - -
Glsi10g0759 353 SUPERFAMILY t-snare proteins 54 316 IPR010989 GO:0016020|GO:0016192
Glsi10g0759 353 ProSitePatterns Syntaxin / epimorphin family signature. 267 306 IPR006012 GO:0005484|GO:0006886|GO:0016020
Glsi10g0759 353 MobiDBLite consensus disorder prediction 193 239 - -
Glsi10g0759 353 SMART tSNARE_6 256 323 IPR000727 -
Glsi10g0759 353 Pfam SNARE domain 297 349 IPR000727 -
Glsi10g0759 353 Coils Coil 232 255 - -
Glsi10g0759 353 CDD SNARE_syntaxin5 264 342 - -
Glsi10g0759 353 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 261 323 IPR000727 -
Glsi10g0759 353 MobiDBLite consensus disorder prediction 21 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0759 Glsi-ChrGlsi10 4839586 4843042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0759 1 353 SNARE and Associated Proteins AT3G24350 65.591 1.27e-148 422