Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0747 ATGAATACAGAGAGTACAATTTGTGCCAAAGATGAAGAGCGTCCAGTCCGGATCACGCGAGCAAGAGCTAGGGCCCTGGGATCATTGGGAGGTATACCTCCCTCCTCAAGACCATCCTTTAAACCAGAACAGAGGTGTGTCCTTCGAGCAAATTCCAAAAGAGCAGCATCTGATGAGAACAAAACTTCTGTGGTTGCCTCTGCTGATCTTCAGCATAAGAGGAGGGCAGTGCTTACAGATGCAACTAACATCTGCCAAAATCCATACAATAAGTATAATAATGCATCAAAATTTCAGGCAAGAGAAGTTTATTTGAAGAAAAACACAAAACTAGCTTCAGATATCTCCAGAGAAGTTTCGTCAACACAAGAGGATGTTAAAACAAAGTTAGCTGAAGAATTGTCCAAAATAAGGATGGTGGAATCACATGACACCACTGTTGAAGTAAGTTTGGAAGGCAAAAAGCCACGACAACGATACGCACCCAATAGCAAAAGAGGCGTTTCAGCACATCCCTTGCAATCGATGCAGGACTCTGTGAAGTCAGATGAACTCCTGAACCCTCCAAAAGACTTAGATATGATTTGTGAGAAAAAAGGAGCCTCAGATGGCCTGGGCATTGTGAACATTGATTCAGAGTTAAAGGATCTTAAAGTTTGGAGTTTATATGCCCCGCTTATATACAACAATATACGTGTCACAGAGCTTGAAAGGAGACCATTGACCAATTACATGGACAAGTTGCAGCGAGAGATCACTCAAAGCATGCGGAGAATTCTGATTGATTGGCTTGTGGAGGTTTCTGAGGAATATAAGCTGGTTCCAGACACTCTTTTCCTTACCGTAAATCTCATAGATCGGTTTCTCTCTAAAAGTTTGATTCAGAAACAAAGGCTTCAGCTGCTTGGGGTTACTTGCATGTTGATTGCATCAAAATACGAGGAGATTTGTGCTCCTCGGGTGGAAGAATTTTGCTTCATCACTGATAATACATACGAAAGAGAAGAGGTATTGAAAATGGAGAATGAGGTTTTAAATGTCTTGCATTTTCAGTTATCTGTTCCGACCACCAAAACATTTCTAAGGAGATTCATCCAAGTAGCACAATCTTCCTATAAGGTTCCTTGTGTTGAACTGGAGTTCCTGGCGAATTACTTGGCAGAGCTTACTCTCACTGAATACAGCTTCCTGAAGTTCCTTCCTTCCCTGATAGCTGCATCCGCTGTGTTTTTTGCCAGATGGACGCTCAACCAGTCGGAGCACCCATGGAATACAACTCTGGAGTACTATACAAATTACAAAGCATCAGAACTTAAAACTACTGTGCTTGCACTGGAAAATTTGCAGCTTAGTACAAAAAGCTGTTCGCTGAATGCCATACATGAAAAATATAAACAACAGAAGTTCAACTGTGTGGCAAAATTGTCTCCAAAATCGGTGCTGCCACTCTTCAAGGTCAAGTGTAAATGA 1470 0.417 MNTESTICAKDEERPVRITRARARALGSLGGIPPSSRPSFKPEQRCVLRANSKRAASDENKTSVVASADLQHKRRAVLTDATNICQNPYNKYNNASKFQAREVYLKKNTKLASDISREVSSTQEDVKTKLAEELSKIRMVESHDTTVEVSLEGKKPRQRYAPNSKRGVSAHPLQSMQDSVKSDELLNPPKDLDMICEKKGASDGLGIVNIDSELKDLKVWSLYAPLIYNNIRVTELERRPLTNYMDKLQREITQSMRRILIDWLVEVSEEYKLVPDTLFLTVNLIDRFLSKSLIQKQRLQLLGVTCMLIASKYEEICAPRVEEFCFITDNTYEREEVLKMENEVLNVLHFQLSVPTTKTFLRRFIQVAQSSYKVPCVELEFLANYLAELTLTEYSFLKFLPSLIAASAVFFARWTLNQSEHPWNTTLEYYTNYKASELKTTVLALENLQLSTKSCSLNAIHEKYKQQKFNCVAKLSPKSVLPLFKVKCK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0747 489 PANTHER CYCLINS 176 466 IPR039361 -
Glsi10g0747 489 Gene3D - 240 353 - -
Glsi10g0747 489 SMART Cyclin_C_2 355 478 IPR004367 -
Glsi10g0747 489 Gene3D - 227 474 - -
Glsi10g0747 489 Pfam Cyclin, N-terminal domain 227 353 IPR006671 -
Glsi10g0747 489 FunFam Mitotic cyclin 6 240 340 - -
Glsi10g0747 489 SMART cyclin_7 262 346 IPR013763 -
Glsi10g0747 489 SMART cyclin_7 359 447 IPR013763 -
Glsi10g0747 489 SUPERFAMILY Cyclin-like 354 479 IPR036915 -
Glsi10g0747 489 PIRSF Cyclin_A_B_D_E 35 486 IPR046965 GO:0016538|GO:0044772
Glsi10g0747 489 MobiDBLite consensus disorder prediction 156 177 - -
Glsi10g0747 489 CDD CYCLIN_AtCycA-like_rpt2 355 469 - -
Glsi10g0747 489 ProSitePatterns Cyclins signature. 257 288 IPR006671 -
Glsi10g0747 489 FunFam Cyclin A1 342 474 - -
Glsi10g0747 489 Pfam Cyclin, C-terminal domain 355 477 IPR004367 -
Glsi10g0747 489 SUPERFAMILY Cyclin-like 217 352 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0747 Glsi-ChrGlsi10 4725964 4731847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0747 4 484 Core Cell Cycle Gene Families AT5G25380 52.761 4.82e-154 444