Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0744 ATGGCCGTGCTGAGAATGGCACAGCACAACAATGGCAAAAAAAGTACGAGCCAACAGTTAGTGAAAGCAGTCTTCCATGACTTTATGGGCATGAAGCCTACTGATTCGCCTGTGGTTTTGGCCCCTAAGACCGCCGATGTGAGGCTATCTGAGGCGTCGCCATCAGTTTCTGTGGGCACCTCTTCTGGCGGTGCCCGGGGCCCCCTCTCCGCCACCTCTGATATCGGTTCCGAAAGACAGTTAGGAGATCATCTCGAGGGAGTTCCATTCTATTGCCCAAGAAGTGATTTTTCTGGCACTGAGATAACAAACAGAATAGTAGGAAACAAGAGAAGTAATTCTGATTCCACTTTTATGGGTTCCTCCAGAGATGCCTACCAAATGGTTCCTGACTCCCTTCAAAACTCACATATAATGAAGATCCTCCGTAATGCAGCTGGAGGTGAGCGACATAGAAGGTCCAATGATGATGATGTGTTTCTTGGTATGCAGCCAATGAAACCAACTTCTGCTTCTCAGATATATCAGCCTCCTGCCAGCACTAAGATTGATGTTAAAAAATGGGAGCGATCTATCCTCATGAATGCTGGCCCTTCCATGCAACATCCATCACATGGGGGTCAATTGGCACCTTTTGTGAACCAGAATGCTTCAAACAAGATCAGGGATACCAATGCTGGTCCTTCATTTATCTCTCAGTCAGCTGCTGATGAAGGATCGAGAACAGGAATTAAGGGCCCTCGAATTTTGAGTTCTATAAACACTACCCTTGCTGCCTCTGAGAAATCTCTGTCTGCAGTGCTCCTTGGTGGAAGCAGTTCAAAGCCCATGACTGGTGTAATAGACCCAGAATCTTCCACACCTCCAAGTCGACATGGGTTAGCTTCTGCCAGCCGCCAGATGACTATTTTTTATGGAGGTCAAGCTCATGTGTTTAATGATGTCCACCCTAATAAGGCAGATGTTATAATGACTTTAGCTGGGTCAAATGGTGGGTGTTGGTCCACAACATACTCGCCCAAATCTTCTGTGAAGCATATTAATAATTGTAACTTACTTTGTGGAGAAAATGAAACTGGTATAGTGAGTAACATGACACTTCCAAAGGAGCTTCATGGGAGATTATCTTTTACTGGCAGTTCTAGTCACGCCATTAGGTCTGGTGACCGAGTATCTACTCAAGCAGGGGCACATCAAGGAAGCATTGTAGTTAAAGATACGAGAAATTCAGTTCAAGCAGCAGATCCCTGTTCTGAGGACAAAAGGGCGCAATGA 1275 0.458 MAVLRMAQHNNGKKSTSQQLVKAVFHDFMGMKPTDSPVVLAPKTADVRLSEASPSVSVGTSSGGARGPLSATSDIGSERQLGDHLEGVPFYCPRSDFSGTEITNRIVGNKRSNSDSTFMGSSRDAYQMVPDSLQNSHIMKILRNAAGGERHRRSNDDDVFLGMQPMKPTSASQIYQPPASTKIDVKKWERSILMNAGPSMQHPSHGGQLAPFVNQNASNKIRDTNAGPSFISQSAADEGSRTGIKGPRILSSINTTLAASEKSLSAVLLGGSSSKPMTGVIDPESSTPPSRHGLASASRQMTIFYGGQAHVFNDVHPNKADVIMTLAGSNGGCWSTTYSPKSSVKHINNCNLLCGENETGIVSNMTLPKELHGRLSFTGSSSHAIRSGDRVSTQAGAHQGSIVVKDTRNSVQAADPCSEDKRAQ 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0744 424 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 98 369 IPR040390 -
Glsi10g0744 424 MobiDBLite consensus disorder prediction 379 414 - -
Glsi10g0744 424 ProSiteProfiles Tify domain profile. 294 329 IPR010399 -
Glsi10g0744 424 SMART tify_2 294 329 IPR010399 -
Glsi10g0744 424 MobiDBLite consensus disorder prediction 51 71 - -
Glsi10g0744 424 MobiDBLite consensus disorder prediction 379 424 - -
Glsi10g0744 424 Pfam tify domain 296 328 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0744 Glsi-ChrGlsi10 4713379 4717754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0744 6 327 Tify Gene Family AT4G32570 37.353 2.71e-51 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Glsi10g0744 tify 1.1e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0744 10 4713379 4717754 Glsi08g1545 08 11152770 11155936 CCT