Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0734 ATGAGATCAATGGAGAGAAGTGACATCTCCAGAGTTGATAGTCTACGCGTGAGTAGTTCTGACATCTGGAGGAGCAATAGCATGGAAATGTTTTCAACATCCGCTCGTGAAGATGATGAAGAAGCTCTAAAGTGGGCGGCAATAGAGAGACTCCCTACCTATCTACGCATAAGGAGAAGTATACTCCCCAATGCACAGGGTACAGCAACAGAAGTTGATATCAAGCAGCTAGGATTAACGGAGAGAAAGATTTTGTTGGAGAGACTCATGGAAATAGCACAAGAAGATAACGAGAAGTTCCTGTTGAAACTCAAGGATCGCATGGACCGAGTTGGAATTGATATACCAACAATTGAAGTTCGATTTGAGCATGTGAATGTGGAAGCACAAGTCTACGTCGGAAGCAGGGCACTCCCTACATTACTCAACTTCTTTGTGAATGTATTAGAGGGATTCTTAAATTATCTTCACATCATTCCAAGTCCAAAGAAACCCTTACATATCCTTCAGAATGTCAGTGGAATCATAAAGCCTCAAAGAATAACATTGCTTTTAGGGCCCCCAAGCTCTGGAAAGACTACTTTGCTATTGGCCTTGGCTGGAAAGCTCAGTAAGGATTTAAAATATTCTGGAAGAGTAACATATAACGGACATGGGCTGGAAGAATTTGAACCTCAGAGGACATCGGCTTATATAAGTCAACATGATATCCACATTGGAGAGATGACCGTGAGAGAAACACTAGCTTTCTCGGCAAGATGTCAAGGGGTTGGGCAGAATTATGAAATGCTGGCAGAGCTGCTAAGAAGAGAGAAGGAAGCAAAGATTAAGCCAGATCCTGATATTGATGCCTATATGAAGGCAGCAGCACTAGAAGGCCAGGAGACAAGCGTGGTCACTGACTACATTCTCAAGATTTTGGGACTTGATGTCTGTGCTGACATTATGGTAGGAGATGGAATGATAAGAGGTATCTCAGGTGGACAGAAAAAGCGAGTAACAACAGGGGAGATGCTGGTTGGACCTATAAGAGTGCTGTTCATGGATGAGATATCAACTGGTTTGGACAGTTCAACAACTTTTCAAATAATCAATTCAATCCGTCAATCCATCCATATTCTCAATGGAACTGCACTTGTCTCCCTCCTACAGCCAGCACCAGAAACTTATGAACTATTTGATGATATAATACTTCTCACAGATGGGCAAATTGTGTTCCATGGTCCAAGAGAAAATGTACTTGAGTTCTTTGAATCTATGGGTTTCAAGTGTCCTGAAAGAAAAGGAGTTGCTGACTTCTTACAAGAAGTGACATCAAGAAAAGATCAATGGCAGTACTGGGCACGTAAAGATGAACTTTACAACTTTGTCACTGTCAAGGATTTTGCTGAAGCCTTCCAGTCATTTCACATTGGTCATAAACTTGGAGAAGAGCTGGCCAATCCTTTTGACAGGTCTAAATGCCACCCAGCTTCCTTGACCACGAAGAAATATGGTGTTAGCAAGAAAGAGCTGCTGAGGGCTTGTGTTAGCAGAGAATTTTTGCTTATGAAGAGAAATTCTTTTGTCTACATTTTCAAAGCCACCCAACTTATTTATCTAGCAATCATGACAACAACTTTATTTCTACGAACTAAGATGCATCGGGATACTATTGCGGACGGAGGGACTTATATGGGTGCTATGTTCTTCGCAATCCTTGTAGCAATGTTCAATGGGATATCAGAGCTAAATATGGCAATCATGAAACTTCCCGTATTTTACAAGCAAAGAGACCTTCGTTTCTATCCTTCATGGGCCTATTCTCTACCACCATGGATCCTCAAAATACCAATCACCCTTGTAGAAGTTGCCATTTGGGAAGGCATCAGTTATTATGCCATTGGCTTTGATCCAGATATTGAAAGGCTTTTCAAACAGTACTTGTTACTGCTGTGTATTAACCAGATGGCGTCTGCACTATTTCGATTGACGGCAGCATTAGGAAGAGACATAGTGATTGCAAACACTGCTGGGGCATTCGCTTTACTTGTGATTATGGTTTTGGGTGGATTTGTGATTTCACGAGAGGATGTCCACAAATGGTTTCTGTGGGGTTATTGGTCCTCTCCACTGATGTATGGACAGAATGCCATGGCTGTGAATGAATTTCTCGGCCATAGTTGGAGAAAGGTTACCGGTAATAGCAGGGAAACATTGGGCGTTTTGGTATTGAAATCTCGTGGGCTTTTCCCAGCAGCTTATTGGTATTGGATTGGAGTAGGAGCTTTGATTGGTTATACCTGTCTATTTAATTTCCTTTTCACCTTGGCTTTGCAATATCTCAATCCATTCAGACAGGCTCAAGCAGGGCTATCCCAAGAGAAATTACTTGAGAGAAATGCTGCAAAAACTATAGAGCTCTTTGAAAAATCACCAACAGGAAAGAGCTCCTCTGAAGATAAGACTGAAGAAGCAGGTCTATCATCCAGGTCATTTTCTGGTAGAGTGAGTGATAGAAAAGCCCGTAGAAGTGGAATGCGGGGTATGGTTCTTCCTTTTCAACCTTTATCCCTCACTTTTGACGAGATCAGATATTCTGTAGACATGCCACAGGAAATGAAAAATCGAGGAGTTTTCGAGACTCGTCTTGAACTTTTGAAGGGTGTTAGCGGAGCTTTTAGACCTGGAGTACTAACAGCTTTGATGGGTGTAAGTGGTGCCGGTAAGACTACTCTAATGGATGTTTTAGCTGGAAGAAAAACTGGTGGATATATTGAAGGAAGCATCACAATATCCGGGTACCCAAAGAAACAAGAAACATTCGCTCGCATATCAGGATATTGTGAACAATTTGATATCCACTCACCCTATGTTACAGTTTATGAATCTTTGCTATATTCTGCATGGCTTCGGTTGCCCCCTGAAGTTGATTCTGCAACTAGAAAGATGTTCATTGAGGAAGTTATGGAGCTTGTGGAGCTTAGCTCATTAAGAGAAGCACTTGTTGGATTGCCAGGAGAGACTGGACTTTCAACGGAGCAGCGCAAGAGGCTTACAATTGCAGTTGAACTTGTAGCTAACCCTTCAATAATATTTATGGATGAGCCAACCTCCGGTCTTGATGCCAGAGCAGCCGCAATTGTAATGCGAACCGTGAGGAACACCGTGGACACAGGACGCACTGTGGTTTGCACCATCCACCAGCCAAGCATTGATATATTTGATTCCTTCGATGAGCTGCTACTTCTGAAATTGGGAGGAGAGCAGATATATGCCGGTCCATTAGGCCGCCACTGTTCCCATCTGATCCAGTACTTTGAGGCTATTCAAGGAGTTCCTAGGATCAGAGATGGTTATAATCCTGCAACATGGATGTTGGAGGTTACATCCACAGGAACAGAAGCAAATCTTAGGGTCAACTTCACTAATGTGTACAGAAACTCAGAACTCTACCGGAGAAACAAACAATTGATCCAGGAGCTTAGTACGCCTCCTCAAGATTCAAAAGATCTGAATTTTGCTAATCGGTATTCACAGCCTTTTTTCCCACAATGCATAGCTTGTCTATGGAAACAGCATTTATCGTATTGGCGGAACACGTCATATACTGCAGTGAGGCTCCTATTTACAACAATCATAGCTTTATTGTTTGGGATAATTTTTTGGAACATTGGCTTGAAAAGGAGAAAGGAGCAAGATCTTTTCAATGCAATGGGTTCAATGTATGCTGCTGTCACCTTCATTGGGGTACAAAATGCAGCCACAGTGCAGCCCATAATAGCTGTTGAGAGAACAGTGTTCTACAGAGAAAGAGCTGCTGGAATGTATTCCGCTTTGCCATATGCTCTTGCACAGGTTATTATCGAACTTCCTCACGTCTTGATTCAGTCTCTGATATATGGTGTTATAGTATACGCCATGATGGGATTTCAGTGGACAACATCCAAGTTCTTGTGGTTTATTTTCTTCATGTACTTCACCTTTTTATACTTCACATTCTATGGGATGATGACCATGGCCATTACTCCGAACCCTCACATTGCTGGCGTATTATCGAGCGCCTTCTTTGCAATATGGAACCTTTTCTCTGGCTTCATCATTCCCTTGTCGAGAATACCCGTATGGTGGAAGTGGTACTATTGGCTTTGCCCTGTTGCCTGGACCTTGCATGGATTGATTGCCTCGCAATTCGGAGACGAAAAGGACAAACTGGAGAGCGGCCAAACAGTTGAAGAATTTGTGAGGAGTTACTTCGGATTTAAACATGAATTTTTGGGAGTAGTTGCAGTTGCGGTGACGGGTTTCTCAGTTTTCTTCGCCCTCATCTTCGCCTTCGGCATCAAAGCATTGAACTTCCAGAAAAGATAA 4350 0.4253 MRSMERSDISRVDSLRVSSSDIWRSNSMEMFSTSAREDDEEALKWAAIERLPTYLRIRRSILPNAQGTATEVDIKQLGLTERKILLERLMEIAQEDNEKFLLKLKDRMDRVGIDIPTIEVRFEHVNVEAQVYVGSRALPTLLNFFVNVLEGFLNYLHIIPSPKKPLHILQNVSGIIKPQRITLLLGPPSSGKTTLLLALAGKLSKDLKYSGRVTYNGHGLEEFEPQRTSAYISQHDIHIGEMTVRETLAFSARCQGVGQNYEMLAELLRREKEAKIKPDPDIDAYMKAAALEGQETSVVTDYILKILGLDVCADIMVGDGMIRGISGGQKKRVTTGEMLVGPIRVLFMDEISTGLDSSTTFQIINSIRQSIHILNGTALVSLLQPAPETYELFDDIILLTDGQIVFHGPRENVLEFFESMGFKCPERKGVADFLQEVTSRKDQWQYWARKDELYNFVTVKDFAEAFQSFHIGHKLGEELANPFDRSKCHPASLTTKKYGVSKKELLRACVSREFLLMKRNSFVYIFKATQLIYLAIMTTTLFLRTKMHRDTIADGGTYMGAMFFAILVAMFNGISELNMAIMKLPVFYKQRDLRFYPSWAYSLPPWILKIPITLVEVAIWEGISYYAIGFDPDIERLFKQYLLLLCINQMASALFRLTAALGRDIVIANTAGAFALLVIMVLGGFVISREDVHKWFLWGYWSSPLMYGQNAMAVNEFLGHSWRKVTGNSRETLGVLVLKSRGLFPAAYWYWIGVGALIGYTCLFNFLFTLALQYLNPFRQAQAGLSQEKLLERNAAKTIELFEKSPTGKSSSEDKTEEAGLSSRSFSGRVSDRKARRSGMRGMVLPFQPLSLTFDEIRYSVDMPQEMKNRGVFETRLELLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGSITISGYPKKQETFARISGYCEQFDIHSPYVTVYESLLYSAWLRLPPEVDSATRKMFIEEVMELVELSSLREALVGLPGETGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDSFDELLLLKLGGEQIYAGPLGRHCSHLIQYFEAIQGVPRIRDGYNPATWMLEVTSTGTEANLRVNFTNVYRNSELYRRNKQLIQELSTPPQDSKDLNFANRYSQPFFPQCIACLWKQHLSYWRNTSYTAVRLLFTTIIALLFGIIFWNIGLKRRKEQDLFNAMGSMYAAVTFIGVQNAATVQPIIAVERTVFYRERAAGMYSALPYALAQVIIELPHVLIQSLIYGVIVYAMMGFQWTTSKFLWFIFFMYFTFLYFTFYGMMTMAITPNPHIAGVLSSAFFAIWNLFSGFIIPLSRIPVWWKWYYWLCPVAWTLHGLIASQFGDEKDKLESGQTVEEFVRSYFGFKHEFLGVVAVAVTGFSVFFALIFAFGIKALNFQKR 1449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0734 1449 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 153 426 IPR003439 GO:0005524
Glsi10g0734 1449 Pfam ABC-2 type transporter 1178 1391 IPR013525 GO:0016020|GO:0140359
Glsi10g0734 1449 Pfam ABC-2 type transporter 505 717 IPR013525 GO:0016020|GO:0140359
Glsi10g0734 1449 FunFam ABC transporter G family member 34 156 460 - -
Glsi10g0734 1449 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 7 1449 - -
Glsi10g0734 1449 FunFam ABC transporter G family member 40 866 1096 - -
Glsi10g0734 1449 CDD ABCG_PDR_domain2 849 1087 IPR034003 -
Glsi10g0734 1449 Pfam Plant PDR ABC transporter associated 722 783 IPR013581 -
Glsi10g0734 1449 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 852 1104 IPR003439 GO:0005524
Glsi10g0734 1449 CDD ABCG_PDR_domain1 151 408 IPR034001 -
Glsi10g0734 1449 Gene3D - 866 1101 IPR027417 -
Glsi10g0734 1449 MobiDBLite consensus disorder prediction 803 834 - -
Glsi10g0734 1449 Pfam ABC-transporter N-terminal 94 144 IPR029481 -
Glsi10g0734 1449 Pfam ABC-2 type transporter 384 434 IPR043926 GO:0140359
Glsi10g0734 1449 SMART AAA_5 889 1081 IPR003593 GO:0016887
Glsi10g0734 1449 SMART AAA_5 178 403 IPR003593 GO:0016887
Glsi10g0734 1449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 426 IPR027417 -
Glsi10g0734 1449 Gene3D - 156 462 IPR027417 -
Glsi10g0734 1449 Pfam ABC transporter 169 351 IPR003439 GO:0005524
Glsi10g0734 1449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 874 1089 IPR027417 -
Glsi10g0734 1449 Pfam ABC transporter 880 1032 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0734 Glsi-ChrGlsi10 4655167 4661978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0734 877 1064 Calmodulin-binding Proteins AT2G36910 26.108 4.08e-06 49.7