Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0730 ATGTTCCCACCCAGTCAGTCCCACCGTCTTCTGCTCGAGGGCACCACAGCATATATACCCTCTGCCCTCGTGATTCCGGATCGCATCCTTCATTCTGCAATTCCATTGTTCTTTGGTATAGGCGTGACAATCTTGGTGCTCCCCGGCACCTCTACAGAGTATGTAATTCAATCTTCTTCTTCTTCTCCCAACAAGGCCGCCCTACTCAATGTGCATCAAGCTATGCGCTGTAATTTGAAATGTACCCTCGTTTCCTATTATTCCATTCTGTTCTTGTTCTTCACCGTCCACACAGTTGGCGATCGAATCATGACAACCCCATTCAAGGGCATAATTCAAGACGTCAGAGGAAGAGCTGCATGCTATAAACAAGACTGGGTTGGCGCAATCTGTTCTGGTGTTAGAATATTGGCTCCAACTTTCTACATATTCTTTGCTTCTGCTCTCCCTGTTATTGCCTTTGGAGAGCAACTTAATGGAAGCTTGAGCACAGTGGAAACATTAGCATCTACTGCTATTTGCGGACTTATCCACTCCATATTTGGTGGACAGCCTTTGTTGATTTTAGGAGTTGCTGAACCCACTGTTATAATGTACTTGTATATGTACGATTTTAGTAGAAAAAGGCCAGAGCTGGGTACCAAGTTGTTTCTGGCTTGGGCCGGTTGGGTCTGTGTCTGGACTGCACTCTTGTTGATTCTGCTAGCAATTTTTAATGCTTGCACAATTATCACTAGGTTTACTAGAATCGCAGGGGAATTATTTGGCATGTTAATTACTGTCCTATTCTTTCAAGAAGCTATAAGGGGACTAATAGGCGAGTTTAGTATTCCGAAGGCTGAAAATCCATCAGCAGAGGAATTTCAATTCCAATGGCTGTATACAAATGGATTACTTGCAACCATTTTCTCTTTTGGGTTACTTATCACCGCCATTAAAAGCAGAGGAGCAAGATCATGGCGGTATGGAACAGGGTGGCTACGAGGTTTCATTGCAGATTATGGGGTTCCAATGATGGTCGTGTTATGGACTGCGTTGTCCTATACTGTTCCGAGCGAAGTTCCACAGGGTGTTCCTAGAAGGTTGAATTGTCCTCTTCCTTGGGAATCTGCATCTCTCTACCACTGGACAGTAGTGAAGGACATGGGGAAGGTATCCTTTGTCTATATCTTGGTGGCATTCATTCCTGCTGTGATGATAGCAGGTTTATACTTTTTTGATCACAGTGTAGCCTCCCAGCTGGCTCAGCAGAAGGAGTTTAACCTTCAAAAACCATCTGCCTACCACTATGACATTTTACTCCTTGGAATTATGACTCTGATTTGTGGGCTTCTGGGGCTTCCTCCATCAAATGGAGTCCTTCCACAGTCGCCAATGCATACAAAGAGTTTGGCGGTTCTTAGGAGGCAGTTGATCCGAAAGAAGGTGGTAAAAAGCGCCAAAGAATGCATTAAGCAACAAAGAAGCGATTCTGAATTATACGGAAAGATGCAGGCTGTGTTTATAGAAATGGACACAGACCCTACGGTTAAGGAGTTGGAGACTTTGAAGGAGGCTGTAATGAAATGTGATAACAAGGATGGTGAAAAAGTCAAATTTGATCCTGAGATGCACATAGATGCCTATCTACCCGTCCGGGTTAATGAGCAAAGAATGAGCAACGCTTTGCTGTCCATCCTGGTGGGCGTATCAATTGTGGGTATCTCGATTATCAAAATGATACCTACTTCAGTTCTATGGGGATATTTTGCTTACATGGCAATTGATAGCCTGCCAGGGAATCAATTCTGGGAAAGGATATTGCTTCTCTTCATCACCCGAAGCCGGCGTTACAAAATATTGGAAGGTTCTCATGCTTCATTCGTGGAGACAGTTCCATTCAAGACCATAGCTGCATTTACACTCATCCAGTTTGCATATTTCCTGTTCTGTTTTGGGGTTACATGGATACCTATAGGTGGGATATTGTTTCCACTGCCCTTCTTCCTTCTCATATCCATAAGAGAGCATTTGCTTCCAAGGCTATTCAGCCCTAGCCATCTTCAAGAGCTAGATTGTTCTGAGTACGAGGAAATTGTCGGTGCTCCACGTACTATATCATTGGTGGATAAGGATTCATCTGATACTGATGGTGATAAGAATCCCGAAGATTACAATGATGCTGAGATGTTGGATGAGATGACAACCAACAGGGGAGAGCTGAAACTCAGAACAAGTTTCAATGGTAGAAACCCCAGCTTTAACGAAGACAGGAACTTTCAGACAATCAGGAAAAAGGCATTAGAACGTGGAGATCAAGAGGTTTTTCCTAGAAAGTTCAGAAAAGGATTAGATGGGGTTGGGGGGAGAGACAGAGAGAGAGAATAA 2367 0.4377 MFPPSQSHRLLLEGTTAYIPSALVIPDRILHSAIPLFFGIGVTILVLPGTSTEYVIQSSSSSPNKAALLNVHQAMRCNLKCTLVSYYSILFLFFTVHTVGDRIMTTPFKGIIQDVRGRAACYKQDWVGAICSGVRILAPTFYIFFASALPVIAFGEQLNGSLSTVETLASTAICGLIHSIFGGQPLLILGVAEPTVIMYLYMYDFSRKRPELGTKLFLAWAGWVCVWTALLLILLAIFNACTIITRFTRIAGELFGMLITVLFFQEAIRGLIGEFSIPKAENPSAEEFQFQWLYTNGLLATIFSFGLLITAIKSRGARSWRYGTGWLRGFIADYGVPMMVVLWTALSYTVPSEVPQGVPRRLNCPLPWESASLYHWTVVKDMGKVSFVYILVAFIPAVMIAGLYFFDHSVASQLAQQKEFNLQKPSAYHYDILLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLRRQLIRKKVVKSAKECIKQQRSDSELYGKMQAVFIEMDTDPTVKELETLKEAVMKCDNKDGEKVKFDPEMHIDAYLPVRVNEQRMSNALLSILVGVSIVGISIIKMIPTSVLWGYFAYMAIDSLPGNQFWERILLLFITRSRRYKILEGSHASFVETVPFKTIAAFTLIQFAYFLFCFGVTWIPIGGILFPLPFFLLISIREHLLPRLFSPSHLQELDCSEYEEIVGAPRTISLVDKDSSDTDGDKNPEDYNDAEMLDEMTTNRGELKLRTSFNGRNPSFNEDRNFQTIRKKALERGDQEVFPRKFRKGLDGVGGRDRERE 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0730 788 PANTHER ANION EXCHANGE PROTEIN 104 693 IPR003020 GO:0005452|GO:0006820|GO:0016020
Glsi10g0730 788 Gene3D Helical hairpin bin 118 159 - -
Glsi10g0730 788 Pfam HCO3- transporter family 296 470 IPR011531 GO:0006820|GO:0016020
Glsi10g0730 788 Pfam HCO3- transporter family 107 276 IPR011531 GO:0006820|GO:0016020
Glsi10g0730 788 Pfam HCO3- transporter family 545 636 IPR011531 GO:0006820|GO:0016020
Glsi10g0730 788 FunFam probable boron transporter 2 118 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0730 Glsi-ChrGlsi10 4622498 4626696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0730 107 752 Antiporters AT4G32510 67.620 0.0 922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0730 10 4622498 4626696 Glsi08g1560 08 11234535 11238286 CCT
Glsi10g0730 10 4622498 4626696 Glsi10g0730 10 4622498 4626696 ECH
Glsi08g1560 08 11234535 11238286 Glsi10g0730 10 4622498 4626696 ECH