Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0722 ATGACTAAGAAGAAGAATCCCCTGCTGTTTATGGATGTCTCTATAGATGGGGATCCTGCTGAAAGGATGGTTTTTGAGCTTTTCTATGATATTGCTCCCAAGACTGCAGAAAATTTCCGTGCCCTATGTACAGGAGAAAAAGGGGTCAGTCCAACTACGGGAAAACCACTGCATTACAAGGGTTCTTTCTTCCATCACATTCTAAAAGGCTCCATTGTGAAGGGTGGTGATTTCGTCAATCGAAATGGGACTGGTGGAGAAAGCATATACGGTTTGAAGTTCCCAGATGAGTCTCCTAGGCTTAAGCATGATGCACTAGGTCTTCTTTCCATGGCAATTGCTGATCGCGATACGCTCGGTTCTCAATTTTTGATCACATTGAAAGCTGATCACCATCTTGACAGGAAGCATGTAGTCTTTGGGAAGCTTCTTCAAGGGCATAATATATTAAAGAAAATTGAAGATGTGGGTGATGAAGAAGGGCCTCCAACTGTAACGGTTAAAATAATCAATTGTGGTGAATATAATGAAGATGGAAAGAAGACATATAAATTGACTTCTGAAACCAATAATCATGAAGCACGGCGGAAGGGAAAGCACAAGAAATCTTCGAGAGACAAAAGGAAAAGGAGAAAAAGATACTACTCATCTGATTCAGAGACTTTGTCAGATTCAGACATGGAAACATCAGACTCTGATAGTGATTCTGATTCAGATCTGTCCTCATCATCTTACATAAGTTCTTCCAGCGATGACAGGCGAAGAAAGAGAAAGAGATCTTCTAGGAAAGATAAACATAGACGTAGAAAAAGAAGGGATAAGCGCCGTGACAAGAAACGTAGGAAACGAGATAAGAGATCAAAGCACAGATCAAGAAGGGAATCGGGCAGTGTTACTGATTCAGATAGTGAGAGTAAAAGCGATGGCAGCTCTGATGGTGAAAGTCTTGATGCTCAAGTTAAGGAGCAAAAGCATAAAGATCATTCACAGAAGAATGTTGAAGTTCAGTCTCCTTTAGTTGTGGATAAAGAAGTACCACCCATGCATCATAGAAGGAGGGAAGAAGTGGGTATGCTAGAGAAGGTGGAAGAATGCCCAAAGGAAAATGGAGAACGGTGTGGCAATGGGATTAGAGCTGACTCTAGATCTGACAGAAGTGAGGAGAGGCAGCCTGACGTGATGGATGTTCATCCAGGAAAATCTAGGAGTCGAAGCTTGAGTCCTAAGAGGACCATGAGTAAGAGTATGAGTATTAGTCCCCGGAGAAGTGACAGCAAGAGCCCAAGTGCTAGTCCACAAAGGAAGATGAGCAGAAGCCCTAGTGGTAGTAGAAGCCCTCATGCTCCATCACGGAGGAGTTTCAGTAGAAGTCCTGTTAGGAGCATCAGTAGGAGCATCAGCAGAAGCCCAGTGAGGGGCAGGAGGAGAAGTGTCAGTAGGAGCCCTGTGAGAACTCATTCTCGTAGAAGTGTCAGTAAGAGCCCTGTGAGATCCTTATCTTGTAGCCGCCGGAGCAGGAACTCTCCCAGAACATCTTCACGAAGATCGTTCAGCAGAAGCCCTGTAAGGGTTTCAAGAAAGAGTGTGAGCAGGAGTCCAGTTAAATCCTCTGCAAGAAGCTTAAGCAGAAGTTCTGGCAGGGTCCCTTCAAGGAGAAGCATCAGCCGAAGTCCTGTCATGGCACCTAGCAGAAGCAATCGGCGCAGCTATTCTAGGAGTCCTAGCCCTGTTCATAAGGCAAGGTCACCTCGTGCTAGGAGTTTGTCAAGGAGTGCTCCTGATGCATCACCAAAGCGTATAAGAAGGGGAAGAGGTTTTAGTGAGCGATATTCTTATGCAAGAAGGTATAGAACCCCCTCTCGGTCTCCGGTGAGGTCATACCGATACAATGGAAGAAGTGACCGTGACAGATATTCTAGTTACAGAAGGTATTCACCTAGGCGTTACAGAAGCCCACCACCACGAGGAAGAACACCGCCAAGGTACAGAGGCAGAAGAAGTAGGACACCCTCTGTATCACGCAGCCCTCGTTACCGTGCTCGCCGCTACAGCCGAAGCCGTAGCCCTGTTCACACTCATTCCCCAGCTGAGCCATATAGATCTCGTGTTTCTCCTCATATGGAGAGGCACAGGTCGTCTTCGAGAAGCCGTAGTCCATTACAATCTGAATCTTCTGCTGAATCGCAGTCTCCACGACGGGCTAGTAGAGACAGGTCAAGGTCATCATCATCCAGAAGCCCAGATGGAAAGAAAGGCTTGGTCTCATATGGAGATGGTTCTCCAGATTCAGATCAAAGGTGA 2301 0.4602 MTKKKNPLLFMDVSIDGDPAERMVFELFYDIAPKTAENFRALCTGEKGVSPTTGKPLHYKGSFFHHILKGSIVKGGDFVNRNGTGGESIYGLKFPDESPRLKHDALGLLSMAIADRDTLGSQFLITLKADHHLDRKHVVFGKLLQGHNILKKIEDVGDEEGPPTVTVKIINCGEYNEDGKKTYKLTSETNNHEARRKGKHKKSSRDKRKRRKRYYSSDSETLSDSDMETSDSDSDSDSDLSSSSYISSSSDDRRRKRKRSSRKDKHRRRKRRDKRRDKKRRKRDKRSKHRSRRESGSVTDSDSESKSDGSSDGESLDAQVKEQKHKDHSQKNVEVQSPLVVDKEVPPMHHRRREEVGMLEKVEECPKENGERCGNGIRADSRSDRSEERQPDVMDVHPGKSRSRSLSPKRTMSKSMSISPRRSDSKSPSASPQRKMSRSPSGSRSPHAPSRRSFSRSPVRSISRSISRSPVRGRRRSVSRSPVRTHSRRSVSKSPVRSLSCSRRSRNSPRTSSRRSFSRSPVRVSRKSVSRSPVKSSARSLSRSSGRVPSRRSISRSPVMAPSRSNRRSYSRSPSPVHKARSPRARSLSRSAPDASPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRSDRDRYSSYRRYSPRRYRSPPPRGRTPPRYRGRRSRTPSVSRSPRYRARRYSRSRSPVHTHSPAEPYRSRVSPHMERHRSSSRSRSPLQSESSAESQSPRRASRDRSRSSSSRSPDGKKGLVSYGDGSPDSDQR 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0722 766 MobiDBLite consensus disorder prediction 195 212 - -
Glsi10g0722 766 SUPERFAMILY Cyclophilin-like 4 177 IPR029000 -
Glsi10g0722 766 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Glsi10g0722 766 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Glsi10g0722 766 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Glsi10g0722 766 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Glsi10g0722 766 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Glsi10g0722 766 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Glsi10g0722 766 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 10 174 - -
Glsi10g0722 766 MobiDBLite consensus disorder prediction 183 766 - -
Glsi10g0722 766 MobiDBLite consensus disorder prediction 702 716 - -
Glsi10g0722 766 MobiDBLite consensus disorder prediction 255 290 - -
Glsi10g0722 766 MobiDBLite consensus disorder prediction 469 491 - -
Glsi10g0722 766 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Glsi10g0722 766 MobiDBLite consensus disorder prediction 405 468 - -
Glsi10g0722 766 Gene3D - 1 175 IPR029000 -
Glsi10g0722 766 MobiDBLite consensus disorder prediction 628 643 - -
Glsi10g0722 766 MobiDBLite consensus disorder prediction 492 576 - -
Glsi10g0722 766 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Glsi10g0722 766 MobiDBLite consensus disorder prediction 344 399 - -
Glsi10g0722 766 MobiDBLite consensus disorder prediction 291 332 - -
Glsi10g0722 766 MobiDBLite consensus disorder prediction 730 745 - -
Glsi10g0722 766 MobiDBLite consensus disorder prediction 595 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0722 Glsi-ChrGlsi10 4579516 4585227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0722 25 170 U-box Gene Family AT5G67530 39.865 6.72e-20 92.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0722 10 4579516 4585227 Glsi10g0722 10 4579516 4585227 ECH