Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0719 ATGGATTCTCCTGAAGCTGCCAAGAACACTTCCATTTCTACCGCCACTGTCAATACCGCTTCTTCTTCAGAATCTCCTCCGGTTCAAGAGTCCCCCTTTTTCAGCTACGTAAATACCTTATCTCCAATAAAGCCTGTCAAGGCTTCTGGTGTGGCTCAAGGTTTCCTTGGACTCAATTCTCCGCCTCTTGTATTCACATCACCACATATTAATACTCATCGTGGATCACAGTTCTTGGAGAGGCCTCAATGCCCGCCATCGGCCAGTGTAGAAATTTCTCAAAATGACAGCAAGAGTCTTCTCGATAATTCTGATGATTTCAAGAAAGCTAGTTCTTTACTGCTGGGGAAGTTTATAATAGACAATCCGAAGGATTTTGATATCAAGAATGATGCAAATGCCCAACACTGCAGTTCTTCACCGTGTGTAGAATCTGTTGATAAATATTTGGCTGATCCTACGGATATTGATTGTATGTATTCGGGGCATTCAGTCAATGCAGATGTGAAACAATCTGACAAAGTTGAATCATCACTAAATGACATAACTCACTCGGAAGAAACCATATTCAAATTTGATAACAAGAATGGTCCTGGTGACAAGGTGGAAGAACCTTTGCTTTTGACAGAGGAGTCCAAAAAAAATCATCAAGAAAAGTCAACATTTGTTGATGAAACAGGAAAAGTAGAGGGGGGAAAAAAAGATGTTGAACGGCCTTCTCAAGAATGGGCAAAGTTAGAGCGCACTTTCTCTGCTGACCTTGTTTTTGAGAAACAACACTGTGATGATTCACTTGTCCAGTGTGCAGGAAATGAAATGCAAGATCATCATGATGGTACATCTGGGTCGATGCCTGAGCCTTTGCAGAATGTTAAAGAATGCGAAGATTGTGAGAAGGGGCTGACCTCTTATGTAATTGAACAGAACATGTGGCAAGATGGTTCCAAGGTTGATCAGAAGCACCGTGGAATGCGTAGACGTTGCCTTCTGTTTGAGGAGGCTGCATCAAATCCTTTTGAAAGTATTAACGGCAACCCGCTTCCTGCCCATGTTCCAGAAGATTCAATATCATCAGCTGCCTCCTCAGATTCAAAAGATTTAAAAGCTTCTCATACGGCATTAAATGCGACTTCAAGGGAAAAGCAAATGGTCAAGCTGTCCAAACCTATCACTTCCTTATTTTCTCCACCATGTAGTGGAGACTTCCCTATGTCAGGTACCAAGCCATCAGGTATTGGGTTACATTTAAATAGCATTGTAAATGCTATTCCCCATGGTCCTGCTGCACTTACAGGTATGAGAATAACAGATGGTTGTATTGGTTTACAAGACAGTAAGTCAGTGACTTCACTGAGCTGCCGTAATGTGGAGAACATAAACAAGGGTTTAATTTTATCAAATCTGGATGGGCAATCATCAGTCGACACTGAAGATGAGAGGCACGAAATGAATGGTTCAATAACCGCAGGTTCTTTCTCCTCTGAGTCGCCCAGCTTTATAGAACCACCAAATTTGTGGATTCACGTTGAGCATCCTGCAATTCTCCATGATGAGAGGAAATTAAGCTCTATAGATGATGGAAATTTTGAGGATTCCGACCAAACAAGCCCCAAAAAGAAAAATTATTGTGATTGTTTTGCTGCCGGATTATATTGTGATGAGCATTGTGCTTGCCAAGGCTGCTTTAATAGAAAAGAATATGAAGATACTGTTGTTGAGATAAGGCAACAAATCGAATCCCGTAATCCACTTGCCTTTGCACCCAAGATTGTACCACGTGCCCCTGATTGTCCATCAAATAATATGGAGGATTCCAATTTAACGACACCATCATCAGCAAGGCATAAAAGAGGTTGCAATTGCAAAAAGTCAACGTATTACATTGCCATGGAACATGCTTTGAGTGAAGGAAGGGTGAGAAACAGAGTTGAAGAAGGATCAAATAGCACATTTCACAATAAGCCGGAAATGGTGGCAAAGAAGACAGATTTGTTACATGGAGAGTTCTATGATCTGCATCGCCTCTCTCCTCTAACACCATCTTTGCAATGCTCAGACCATGGAAAGGAAGCCGCAAATTTCCGAGCTCCTTCTGGAAAATATTTTCCAGCCCCTGAATCTGATGTTAATGTGTTTCCACCTCATGCAAATTTCCCTAATTCTCCAAAGAACTCAGAGAGCAGTCTTGTGATTCTGGAAACAGAAGAGATGTTAAGAAATGGCTCGTACGATTGCCAACTGGATTGCAACAACGGGGAGATAATGGATCAATCATCACCAAGATGTAATTCAATTAGCAACGTACATCATCTCACTCCTCTGTCTAACCCTCCGTCAATGTATTGTGCTTCATTGTCATCTAAAACAAGGGATCAGACACACATTCCACATGCCCGACTGTCCCAGGGAAGTAGTCGCCCCGTATCTGGCGGTTCCCATCGTTGGCGTATTTCACCTATTACCCCAATGACTAAAGTAGGTGAAACCAAATATCTACAATGTCTTGAATCGGATAGCAGACTTTGTGACATTCTAGAAGATGAAACAACTAACATGTTGAAGGAAGCTTCAACTCCCATTAAGTCCGTGAAAGCAAGATCCCCGAAACAGAAGCGAGTTTCTCCTCCTCACGGTCATCTTCGGGAACTAGGTTCAAGCTCTTCGGTAGGCTTGAAAAGTGGCAGGAAATTTATATTGAAAGCTGTGCCTTCTTTCCCACCATTGACCCCTTGCAGTGACTCCAAAGGCAATGGTAACGAGGATTCAGGTACTAGTATCAGCAAGTGA 2787 0.4227 MDSPEAAKNTSISTATVNTASSSESPPVQESPFFSYVNTLSPIKPVKASGVAQGFLGLNSPPLVFTSPHINTHRGSQFLERPQCPPSASVEISQNDSKSLLDNSDDFKKASSLLLGKFIIDNPKDFDIKNDANAQHCSSSPCVESVDKYLADPTDIDCMYSGHSVNADVKQSDKVESSLNDITHSEETIFKFDNKNGPGDKVEEPLLLTEESKKNHQEKSTFVDETGKVEGGKKDVERPSQEWAKLERTFSADLVFEKQHCDDSLVQCAGNEMQDHHDGTSGSMPEPLQNVKECEDCEKGLTSYVIEQNMWQDGSKVDQKHRGMRRRCLLFEEAASNPFESINGNPLPAHVPEDSISSAASSDSKDLKASHTALNATSREKQMVKLSKPITSLFSPPCSGDFPMSGTKPSGIGLHLNSIVNAIPHGPAALTGMRITDGCIGLQDSKSVTSLSCRNVENINKGLILSNLDGQSSVDTEDERHEMNGSITAGSFSSESPSFIEPPNLWIHVEHPAILHDERKLSSIDDGNFEDSDQTSPKKKNYCDCFAAGLYCDEHCACQGCFNRKEYEDTVVEIRQQIESRNPLAFAPKIVPRAPDCPSNNMEDSNLTTPSSARHKRGCNCKKSTYYIAMEHALSEGRVRNRVEEGSNSTFHNKPEMVAKKTDLLHGEFYDLHRLSPLTPSLQCSDHGKEAANFRAPSGKYFPAPESDVNVFPPHANFPNSPKNSESSLVILETEEMLRNGSYDCQLDCNNGEIMDQSSPRCNSISNVHHLTPLSNPPSMYCASLSSKTRDQTHIPHARLSQGSSRPVSGGSHRWRISPITPMTKVGETKYLQCLESDSRLCDILEDETTNMLKEASTPIKSVKARSPKQKRVSPPHGHLRELGSSSSVGLKSGRKFILKAVPSFPPLTPCSDSKGNGNEDSGTSISK 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0719 928 MobiDBLite consensus disorder prediction 341 366 - -
Glsi10g0719 928 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 540 564 IPR005172 -
Glsi10g0719 928 MobiDBLite consensus disorder prediction 855 890 - -
Glsi10g0719 928 MobiDBLite consensus disorder prediction 793 811 - -
Glsi10g0719 928 MobiDBLite consensus disorder prediction 903 928 - -
Glsi10g0719 928 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 624 IPR044522 GO:0003700
Glsi10g0719 928 MobiDBLite consensus disorder prediction 1 31 - -
Glsi10g0719 928 ProSiteProfiles CRC domain profile. 532 624 IPR005172 -
Glsi10g0719 928 MobiDBLite consensus disorder prediction 210 240 - -
Glsi10g0719 928 MobiDBLite consensus disorder prediction 76 97 - -
Glsi10g0719 928 SMART CXC_2 533 567 IPR033467 -
Glsi10g0719 928 MobiDBLite consensus disorder prediction 793 817 - -
Glsi10g0719 928 MobiDBLite consensus disorder prediction 910 928 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0719 Glsi-ChrGlsi10 4563660 4568838 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0719 28 99 CPP Transcription Factor Family AT4G14770 42.308 3.67e-08 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Glsi10g0719 TCR 4e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0719 10 4563660 4568838 Glsi10g0719 10 4563660 4568838 ECH