Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0717 ATGACTGGCCTAGAAAAAACCATGTTAAAATTGGATGACAAGAAGGACATGGTGGAAGAACCTTTGCTTTTGACAGAGGAGTCTAAAAAGAATCATCAAGAAAAGCCAACATTTGTTGAAGAACCAGTCAACAAAGATATTGAATGTCCTTATCAAGAATGTGCTGAGTTAGAGAACATGTGGGCGACCCCTTATGATTTTGAACAGATCATGTCGCAAGATGGTTCCAAGGCATTTACAATTTCGGTGATTCCATTAAGGATGAAAACACCAAGCACCCCTGCCGACGATAAAAGGTGCAACTGTAAGAAGAGCAAATGTTTAAAACTCTACTGTGATTGTTTTGCTGCCGGATTATATTGTCATAATCATTGTCGTTGCCAAAGCTGCTGTAATAGAGAAGAGTATGACGATCTTGTTGATGAAATAAAGGAAGAGATCGAATCCCGTAACCCACTTGCATTTGCCCCCAGGATTGTACAGCGTGCCACTGATTGTCCATCAAATAATGTGATGCGGCCGCCATTGCAGCTGAGGTTTCGACCGCGAGAGGATAGGAGGAGGGAGGAGGATAAAGGTTTACGTGGCAAAGTGTCAGACTACCCACAAGGAAACGTACGTTCGCTTTGA 630 0.427 MTGLEKTMLKLDDKKDMVEEPLLLTEESKKNHQEKPTFVEEPVNKDIECPYQECAELENMWATPYDFEQIMSQDGSKAFTISVIPLRMKTPSTPADDKRCNCKKSKCLKLYCDCFAAGLYCHNHCRCQSCCNREEYDDLVDEIKEEIESRNPLAFAPRIVQRATDCPSNNVMRPPLQLRFRPREDRRREEDKGLRGKVSDYPQGNVRSL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0717 209 MobiDBLite consensus disorder prediction 181 209 - -
Glsi10g0717 209 ProSiteProfiles CRC domain profile. 96 209 IPR005172 -
Glsi10g0717 209 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 95 167 IPR044522 GO:0003700
Glsi10g0717 209 SMART CXC_2 95 136 IPR033467 -
Glsi10g0717 209 MobiDBLite consensus disorder prediction 181 197 - -
Glsi10g0717 209 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 98 133 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0717 Glsi-ChrGlsi10 4551342 4553250 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0717 98 163 CPP Transcription Factor Family AT4G14770 59.091 2.40e-22 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Glsi10g0717 TCR 1.4e-11 No_clan