Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0716 ATGGCTAACCAAAAAGAAGAAACCGCATTAAAATTTGATGACAAGAAAGACGAGGTGGAAGAATATTTGCTTTTGACAGAGCAATCTAAGAAGAATCATCAAGGAAAGTCAACACTTGTTGATGAACCAGTAAACAAAGATGTTGAATGGCCTTATCAAGAATGTGCGGAGTTGGAGAACATGTGGCAAGATGGTTCCAAGGTTTATCAAAAGCACCTTGTCATGCATAGTCGACGTTGCCTTCAGTTTGAGGAAGCTGCACCAAATCCTTTTGGAAGTATGAACAACAACCCCGTTCCTCCCCACGTTCCACAAGATCCAATATCATCAGCTACCTCTTCCAACTGGCCCAGTTTTATAGAACTGTCAAATTTGTTTATTCAATTTGAGCGTCCCGCAAGTGTCCATAATGGAGGGAAATTAAGCTCTACAGTGGGATCACCAAATCCTACCTTGGTCTTCAGGATGAAAACACCAAGCACACCTGCCGACGATAAAAGGTGCAACTGTAAGAAGAGTAAATGTTTAAAACTCTATTGTGATTGTTTTGCTGCTGGATTATATTGTTGTAAGCATTGTGGTTGCCAAAACTGCTATAATAGAGAAGAGAATGACGATCTTGTTGATGAAATAAAGGAAGAGATCGAATCCCGTAACCCACTTGCATTTGCCCCCAGGATTGTACAGCGTGCCACTGATTGTCCATCAAATAATGTGGAGAATTTCAATCTAACGACATCATCATCCGCAAGACATAGAAGAGACGAAGAAGCGGCGGTGATTGCAGAGCTGAGGTTTCGACCGCGAGAGGATAGAAGGAGGGAGCAGGATAGGGGTTTACGTGGAAAATTCAGACTACCCACTAGGAGAAGCTTGCTCTGA 882 0.4252 MANQKEETALKFDDKKDEVEEYLLLTEQSKKNHQGKSTLVDEPVNKDVEWPYQECAELENMWQDGSKVYQKHLVMHSRRCLQFEEAAPNPFGSMNNNPVPPHVPQDPISSATSSNWPSFIELSNLFIQFERPASVHNGGKLSSTVGSPNPTLVFRMKTPSTPADDKRCNCKKSKCLKLYCDCFAAGLYCCKHCGCQNCYNREENDDLVDEIKEEIESRNPLAFAPRIVQRATDCPSNNVENFNLTTSSSARHRRDEEAAVIAELRFRPREDRRREQDRGLRGKFRLPTRRSLL 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0716 293 ProSiteProfiles CRC domain profile. 164 293 IPR005172 -
Glsi10g0716 293 SMART CXC_2 163 204 IPR033467 -
Glsi10g0716 293 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 166 254 IPR044522 GO:0003700
Glsi10g0716 293 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 166 201 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0716 Glsi-ChrGlsi10 4548316 4550248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0716 166 254 CPP Transcription Factor Family AT3G22760 55.056 1.48e-24 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Glsi10g0716 TCR 2.3e-10 No_clan