Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0715 ATGGCTTTTGCGGTTTCCCCGCCGATATGCCCAAAATCCATGGCCATTCAATGTTTATCATCTCCTCAAAGTGAGCGTTTCCTTGTGGGTAGTCTGACTTTTCCACGTAAACCCCTATCCTGCTCCCTCTTTCTATCCTCTCGCGGTCGAAACCTCAGCTCTGCAATCGCCGCCGCATCTTCGTCTTCCAAAAAGAAAAAGCAAAAGTTGTCTCATAATCAAGTTAAGGAGGGGGATGAGGAAGATGATGCTTTTGAGCTTCTCTTCAAGCAACTGGAAGAAGATCTAAAAAATGATGACATGTCCATGGATAATAGCGATGATGAGATAACTGAGGAAGACCTTGCCAGGTTTGAACGCGAGTTGGAGGACGCATTGGGGGACTATGACACAGAAATGTTAAGCTCAGTCATAAATGATACAGAAACTGACAATATTATTGATGATAAAGAAGAAGAAAAAGAAGATGATGATGATGGAGATGGAAATGGAAGGTCACTGAACCTTAGAAATTGGCAACTGCGGAAATTAGCTAAAGCTCTGAAAGCTGGTCGTCGTAAAACAAGTATCAAAACTCTTGCTGCCGAGCTTTGTCTTGATAGGGCTGTTGTTCTAGAGTTGCTCCGTGACCCTCCTCCAAATCTTTTAATGATGAGTCTGTCATTACCTCATGAACCCACAGCAGCAGCAGCGGAGCCTGAAAACAATCTCATGGAGACTGTTCATAAAGAAATAAGCACGGATCATGCAAAGCCTGAATCAAAGACTAAAGTGCCTGTTCATGTCAGGCAACATAGATGGTCTGCTCAAAAGAGACTGAAAATGGTACAAGTTGACACTCTGGAAAGGATCTATAAGAGAACAAAGAGGCCCACTAATGCGATGATCAGTAGCATCGTGCATGTGACCAACCTTCCTCGCCGAAGAGTTGTTAAGTGGTTTGAAGATAAACGTACTGAGGACGGAGTTCCAGACGATCGAGTTCCATACCAGCGCTCTGTTCCTGAAGCTGCTTGA 1017 0.4415 MAFAVSPPICPKSMAIQCLSSPQSERFLVGSLTFPRKPLSCSLFLSSRGRNLSSAIAAASSSSKKKKQKLSHNQVKEGDEEDDAFELLFKQLEEDLKNDDMSMDNSDDEITEEDLARFERELEDALGDYDTEMLSSVINDTETDNIIDDKEEEKEDDDDGDGNGRSLNLRNWQLRKLAKALKAGRRKTSIKTLAAELCLDRAVVLELLRDPPPNLLMMSLSLPHEPTAAAAEPENNLMETVHKEISTDHAKPESKTKVPVHVRQHRWSAQKRLKMVQVDTLERIYKRTKRPTNAMISSIVHVTNLPRRRVVKWFEDKRTEDGVPDDRVPYQRSVPEAA 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0715 338 SMART HOX_1 270 328 IPR001356 GO:0003677
Glsi10g0715 338 Gene3D - 266 322 - -
Glsi10g0715 338 Pfam Homeodomain 272 319 IPR001356 GO:0003677
Glsi10g0715 338 CDD homeodomain 267 318 IPR001356 GO:0003677
Glsi10g0715 338 MobiDBLite consensus disorder prediction 317 338 - -
Glsi10g0715 338 MobiDBLite consensus disorder prediction 145 159 - -
Glsi10g0715 338 ProSiteProfiles 'Homeobox' domain profile. 264 324 IPR001356 GO:0003677
Glsi10g0715 338 SUPERFAMILY Homeodomain-like 268 323 IPR009057 -
Glsi10g0715 338 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 55 331 - -
Glsi10g0715 338 MobiDBLite consensus disorder prediction 138 167 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Glsi10g0715 Homeodomain 2.9e-06 CL0123