Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0713 ATGCAGGACACAGCAACAAGTTCCATTGCTGCAAGCTCTGTGCCTTCAAGCAGCGAAAAATCTTCAAACTCTGCTCTCCAGCTTGAAGTGAAAGAAGGTCAGGAGAGTGATGAGGAGATCAGAAGGGTGCCGGAGATCGGTGGCGAGTCCGCGGGAACCTCGGCCTCCCGGCCAGACACCGGTTCAGCTGCCGATCCAGAACGGGTTCAGGGGACAGGGGAGGGTCAGAGGAAGAGGGGAAGAACCCCAGCTGACAAAGAAAGCAAGCGGCTCAAGAGGCTGCTGAGGAACAGAGTTTCAGCTCAGCAAGCAAGGGAGAGAAAAAAGGCATACTTGGTTGATTTGGAAGCAAGGGTTAAAGACTTGGAGAAGAAGAATTCGGAGCTGGAGGAGAGGCTGTCCACTTTGCAGAATGAGAATCAGATGCTAAGACATATATTGAAGAACACAACAGCAAGCAGAAGAGGAGGCACTAGTGGTGTCAACGAAGGGACTTGA 498 0.5201 MQDTATSSIAASSVPSSSEKSSNSALQLEVKEGQESDEEIRRVPEIGGESAGTSASRPDTGSAADPERVQGTGEGQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLVDLEARVKDLEKKNSELEERLSTLQNENQMLRHILKNTTASRRGGTSGVNEGT 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0713 165 MobiDBLite consensus disorder prediction 71 108 - -
Glsi10g0713 165 FunFam Transcription factor HY5 108 149 - -
Glsi10g0713 165 Pfam bZIP transcription factor 86 146 IPR004827 GO:0003700|GO:0006355
Glsi10g0713 165 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 92 107 IPR004827 GO:0003700|GO:0006355
Glsi10g0713 165 Gene3D Single helix bin 108 149 - -
Glsi10g0713 165 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 5 158 IPR044280 GO:0000981|GO:0045944
Glsi10g0713 165 MobiDBLite consensus disorder prediction 1 108 - -
Glsi10g0713 165 CDD bZIP_HY5-like 90 141 - -
Glsi10g0713 165 SMART brlzneu 85 149 IPR004827 GO:0003700|GO:0006355
Glsi10g0713 165 Coils Coil 84 146 - -
Glsi10g0713 165 SUPERFAMILY Leucine zipper domain 89 147 IPR046347 GO:0003700|GO:0006355
Glsi10g0713 165 MobiDBLite consensus disorder prediction 31 45 - -
Glsi10g0713 165 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 150 IPR004827 GO:0003700|GO:0006355
Glsi10g0713 165 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0713 Glsi-ChrGlsi10 4538805 4540387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0713 1 146 bZIP Transcription Factor Family AT5G11260 76.871 9.66e-61 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi10g0713 bZIP_1 2.7e-14 CL0018