Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0707 ATGATGTTTGTGCTTTTGTTTCTTTCTGCCTTGCTTATTCAAACCAGTTCAAGCTCTGTGATTGACCTCAATACTTTCTGCTTTCCTTCGTTCAGCCCTGAAAGTTGCAGCAATGGTGAGCTACTCTGTATGGGCTCCGTGACCGCGGGCACTGGCTATTTAAGTCTCACGCCGGACCCACAACCAGGCAATTCAAGTTTACCATCTTCCACAACTAACAAAATAGGCCGAGTTTTGTACCCTCGAAGAGTTCGAGTTTGGCCAGCAATCATGACCACCACCTTCACTGTTAGGATCACTCCAATGCTTAATTCGACCAGCTCCGGTGATGGGATGACATTCGTTTTTGCACAAGATCAGAGTCCCTCACCAAATGGTAGCTACGGTTCATATCTCGGCTTATTTGATAGGTCTACACAAGGACAATTAGCTGTGGAGTTGGACACTTTCATGAATGAGTTTGATCCAGACGGAAACCACATTGGGATAGACACAAGCAGCATCACAAGCCCAATTGCTGCAGTGAGTCTCAATAGCACCGGAGTTAACCTCAAAAGTGGAAGAGACATTGAAGTTAAAATAGAGTATGATGGTTCGACTAATATTCTGTGTATGTCCGTGGGATACTCTGGAAGCCAGTTAAAAAGCGTTCTGAACCATTCAATTGCACTGTCAAATATAGTTCCAAGCTCCGTTTATGTTGGTTTCACAGCCTCCACCGGCAATACTTTGCCCGAAAGCCATCAGGTCCTCAATTGGGTATTCACATCAGTGCCACTGCCCGTTGATTCTGTTAAACCCAGTAAAGATGACACCATCATGACCATACTGCTAATTGTCATACCCATTTTTCTGGTCGTGTCCATAAGCTCAGCTCCATTTATTTGGGAAGCTTTGAAGAAAGGAGATGAGAGGGGTGACAAGGAAGAGGATATAGAAAGCCTATCAAGGACAGCTGCAGATATCCCCAAGGAGTTCACTTACGACCAATTGTCAAAGGCTACTTACAACTTCAGCAAGGAAAATCTTTTAGGCAGAGGCGGATTTGGTAGTGTTTATAAAGGCATCATCATATCAGATCCTCCAAAAACCATAGCAGTAAAGAAGATTTCTGCAACCTCTAAACAAGGTGAAAGAGAGTACTTAGCTGAAATATGTACCATAGGGCGGCTTAGGCACAAAAACTTGGTGCAGCTACAAGGCTGGTGCCATGAACGTGAACATCTTGTCTTAGTCTTTGAATACATGAAAAATGGAAGCCTGGATCGGTTCATAGGCAAGGACATTCTGGACTGGCAAACCAGGCACAAGATATTAGCAGGACTTGCATCAGCATTACTCTACCTTCACGAAGACTGTGTACTTGAAGTGATATGTGGGAGAAGATCAAAGAGAATTATGGAAGAAAGCAGTTTGGTAGACTATGTGTGGAATTTGTATGCTCAAAATGCATTGCTTGAGTGTGTTGACAAAGTACTGAAAGAGCAATTTGATGAGGAAGAAGCAAGAAGGGCATTGATGATTGGGCTGGCATGTTTGCATCCCGATGCCATGTCCCGGCCAAAGATGAGAAAAGTGGTGCACATATTGCTGAACCCAAATGAGCCTCTAATGGAATTACCAGGAATGCGACCTACTGGAGTTTATTTATCAGTATCTTCGTCTACATCAACTACAAACTTTGGCTCTAGAGATGCATATGCACTGATTCAATCATCCACGGTATCATCCGACGAAATATCAATTGCGTACGATCAGCAGTGA 1764 0.4365 MMFVLLFLSALLIQTSSSSVIDLNTFCFPSFSPESCSNGELLCMGSVTAGTGYLSLTPDPQPGNSSLPSSTTNKIGRVLYPRRVRVWPAIMTTTFTVRITPMLNSTSSGDGMTFVFAQDQSPSPNGSYGSYLGLFDRSTQGQLAVELDTFMNEFDPDGNHIGIDTSSITSPIAAVSLNSTGVNLKSGRDIEVKIEYDGSTNILCMSVGYSGSQLKSVLNHSIALSNIVPSSVYVGFTASTGNTLPESHQVLNWVFTSVPLPVDSVKPSKDDTIMTILLIVIPIFLVVSISSAPFIWEALKKGDERGDKEEDIESLSRTAADIPKEFTYDQLSKATYNFSKENLLGRGGFGSVYKGIIISDPPKTIAVKKISATSKQGEREYLAEICTIGRLRHKNLVQLQGWCHEREHLVLVFEYMKNGSLDRFIGKDILDWQTRHKILAGLASALLYLHEDCVLEVICGRRSKRIMEESSLVDYVWNLYAQNALLECVDKVLKEQFDEEEARRALMIGLACLHPDAMSRPKMRKVVHILLNPNEPLMELPGMRPTGVYLSVSSSTSTTNFGSRDAYALIQSSTVSSDEISIAYDQQ 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0707 587 Gene3D - 22 276 - -
Glsi10g0707 587 FunFam serine/threonine-protein kinase PBS1-like 304 415 - -
Glsi10g0707 587 ProSitePatterns Protein kinases ATP-binding region signature. 344 369 IPR017441 GO:0005524
Glsi10g0707 587 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 258 IPR013320 -
Glsi10g0707 587 Gene3D Phosphorylase Kinase; domain 1 323 415 - -
Glsi10g0707 587 CDD lectin_legume_LecRK_Arcelin_ConA 26 257 IPR001220 GO:0030246
Glsi10g0707 587 ProSiteProfiles Protein kinase domain profile. 338 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0707 587 ProSitePatterns Legume lectins beta-chain signature. 143 149 IPR019825 -
Glsi10g0707 587 PANTHER - 454 532 - -
Glsi10g0707 587 Pfam Protein kinase domain 339 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0707 587 Gene3D Transferase(Phosphotransferase) domain 1 453 538 - -
Glsi10g0707 587 SUPERFAMILY Protein kinase-like (PK-like) 325 548 IPR011009 -
Glsi10g0707 587 Pfam Legume lectin domain 25 258 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0707 Glsi-ChrGlsi10 4509496 4511879 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0707 455 549 Receptor kinase-like Gene Family AT5G10530 31.683 2.01e-12 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Glsi10g0707 Lectin_legB 2.9e-46 CL0004