Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0697 ATGACTTCAACTCTCTCCATCTCCAACCATTCTCTGCTTTGCTCAACTGCTTCCTCTCCCTTCTCCGAAATCAATTTTCCCGCCAAATCACAACGGCCGTCTTCCTCGCCGGTCAGGTTCCGCTCTGACAAGCCTAACGAGTTCGTTTCAGGTCAAAATGGCATATCGGCCTCAATTATCAGAAGGAGAGGGCTAATATTTATTGCTACACTACCATGTCTTCTTCCCTTAACTCAAGTCATGGATAGTCGTGGTGCAAACGCGATCGAGCCAGGTACAAAGGAATATCTGTTCATAAAAGAAGAGGTCAGGAAGGTATTGTCAAAAGGAAAGGCAGCAGGTGTGCTTCGTTTGGTTTTCCATGATGCTGGAACCTTTGAAATGGATGATAATACAGGTGGCATGAATGGTTCTATAGTCTATGAACTTGAAAGACCTGAAAATGTTGGACTAAAAAAATCTATTAAGATTCTGCAGAAATCAAAGACTCAAATAGATGCTATAAAACCAGTATCCTGGGCGGACTTGATTGCTGTGGCTGGAGCTGAAGCTGTTGCAGTATGTGGAGGTCCAAATATCCAAGTTTCACTGGGCAGGCTAGATTCATTGGAGCCTGATCCTGAAGGAAAACTTCCTGAGGAATCTCTCAATGCTTCTGGTTTGAAGATTTGTTTCCAGAGAAAAGGCTTTTCAACGCAAGAACTTGTTGCATTGTCTGGAGCCCACACTCTTGGAAGTAAAGGTTTTGGAAGCCCAACTTCTTTTGACAACTCATATTATAAGGTTCTTCTGGAGAATCCATGGATGTCTTCAGGTGGTATGTCAAGTATGATTGGCCTTCCTTCAGATCACGCACTTGTTCAGGACGATGAATGCTTAAGATGGATTAAAAAATACGCGGACAACGAGAATATGTTCTTTGAAGATTTCAAGAATGCGTATGTCAAGCTGGTGAATTCTGGGGTGAGTGGCGTGAATCGCCGAAGATCTTATTCGAGGGAGGTTAGGAACCACGCTCATCTTAGCCCCACCCCACCTAAACTCGACGGCTCCTCAATAACTGCTCTACCTTACACTCTTGGTTCCCTCGATTCAAAAACGCATACAAATTTAAAATTCTTAATTTATCAGAAACATCTACTCTTCAATCTTTCGGATCTCGTTGCTCGGGCTCGGATCCTCCGATCGTTAAATCCATCGTCATTGTCCTCCTCCTCATCTCACCTTTCCGTTATCGGGCAGATCTCTTCTGTACTCTGCAACTCCCCGCTTTATTCTAAGTATCGAAGCTACTCGCCTTTTGATGGCATTTTGACTATCGTTAGTTTTACGAGATCAATGCTTGATGATAGTTTTCAATTTGGAAGTGCGATTTTGCGAATCGAAGTACTATCGAGCATGCTGGTCTTGCTTACTCTTGTTTTATTACCCCTGATTTGCTCGGCTGCCTACTTATAG 1458 0.4342 MTSTLSISNHSLLCSTASSPFSEINFPAKSQRPSSSPVRFRSDKPNEFVSGQNGISASIIRRRGLIFIATLPCLLPLTQVMDSRGANAIEPGTKEYLFIKEEVRKVLSKGKAAGVLRLVFHDAGTFEMDDNTGGMNGSIVYELERPENVGLKKSIKILQKSKTQIDAIKPVSWADLIAVAGAEAVAVCGGPNIQVSLGRLDSLEPDPEGKLPEESLNASGLKICFQRKGFSTQELVALSGAHTLGSKGFGSPTSFDNSYYKVLLENPWMSSGGMSSMIGLPSDHALVQDDECLRWIKKYADNENMFFEDFKNAYVKLVNSGVSGVNRRRSYSREVRNHAHLSPTPPKLDGSSITALPYTLGSLDSKTHTNLKFLIYQKHLLFNLSDLVARARILRSLNPSSLSSSSSHLSVIGQISSVLCNSPLYSKYRSYSPFDGILTIVSFTRSMLDDSFQFGSAILRIEVLSSMLVLLTLVLLPLICSAAYL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0697 485 ProSitePatterns Peroxidases proximal heme-ligand signature. 234 244 IPR019793 -
Glsi10g0697 485 PRINTS Plant ascorbate peroxidase signature 130 140 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi10g0697 485 PRINTS Plant ascorbate peroxidase signature 189 201 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi10g0697 485 PRINTS Plant ascorbate peroxidase signature 170 188 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi10g0697 485 PRINTS Plant ascorbate peroxidase signature 210 227 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi10g0697 485 PRINTS Plant ascorbate peroxidase signature 228 249 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi10g0697 485 PRINTS Plant ascorbate peroxidase signature 298 322 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi10g0697 485 PRINTS Plant ascorbate peroxidase signature 112 127 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi10g0697 485 ProSiteProfiles Plant heme peroxidase family profile. 112 343 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0697 485 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 96 327 IPR044831 GO:0004601|GO:0034599
Glsi10g0697 485 Gene3D - 100 321 - -
Glsi10g0697 485 FunFam L-ascorbate peroxidase 102 219 - -
Glsi10g0697 485 ProSitePatterns Peroxidases active site signature. 112 123 IPR019794 GO:0004601
Glsi10g0697 485 FunFam Adenylate/guanylate cyclase 212 314 - -
Glsi10g0697 485 Pfam Peroxidase 101 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0697 485 Gene3D Peroxidase, domain 2 212 314 - -
Glsi10g0697 485 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0697 485 PRINTS Haem peroxidase superfamily signature 112 126 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0697 485 PRINTS Haem peroxidase superfamily signature 171 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0697 485 PRINTS Haem peroxidase superfamily signature 189 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0697 485 SUPERFAMILY Heme-dependent peroxidases 98 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0697 Glsi-ChrGlsi10 4453005 4462350 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0697 112 317 Peroxidase AT4G16270 30.682 3.96e-23 98.6