Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0696 ATGGAAAAGCCCCGGTCCTTCATCCATATTATTATTGGCACCCTCTGGTTATCTATTCTCGTTTTGTTTGAAATCTGTTTGGCTGGTTTTCAAAGTGTTGGCAAGATCTCTCCGGGGTTTCAAGGCTCTCAAATGAATTGGATTGACAAAAGCGGTATGTTTCTCGTGTCAAATAGTGGAGAGTTTGCGTTTGGCTTTACCACTACCACGAATGACAGCACATTGTTTCTACTAGTAATCGTCCACAGCTACAGCGACAGTTCCAGAGTTGTTTGGACAGCCAATAGAGGACTTCCTGTTAGTAATTCTGATAAATTTGTGTTTGATGAAAAGGGTAATTCCTTCTTACAGAAAGGAGGCACTGTGGTTTGGTCTACAGATACACAGGGCAAAGGAGTTTCGTCAATGGAATTGCAGGACACAGGAAACTTGGTTTTGCTGGGGAACGATAGTACAGTAATTTGGCAGAGTTTCAGCCATCCAACGGATACCTTGTTGCCAACGCAGAACTTCACAGAGGGAATGAAACTTATCAGTGAACCTAGCCCCAACAACTCGACCTATGTTCTTGAGATCAAATCTGGTGATGTAATTCTCTCTGCTGCTTTTCAAAACCCACAGCCTTATTGGTCTATGCAGAAGGATAACCGCAAAATCATCAATAAAGATGGTGGTACAGTGGCTTCGGCTTCCATCAGTGCAAATTCCTGGAGGTTCTATGATGCAAACAAATCCTTGTTATGGCAATTCATTTTTGCCCAAGATTCAGGTACAAATTCCACTTGGGTTGCAGTTTTGGGAAGTGATAGTTTCATGACTTTCTCTAATCTCCGCCGTGAAGATTCAAGTGGTGCCTCACCAACAAGAATACCACAGAGTTCTTGCAGTACACCAGAACCTTGTGATCCATATTACATATGCACAGGTGATAACAATTGCCGTTGTCCTTCTGTTCTTAGCTCTCGTTCTAATTGCAAAACAGGGATTGTCTCTTCTTGTGATAGCTCAAAGGGCCCCGTAGAGCTCATGAGAGCTGATGATGGACTCAATTACTTTGCGCTTGAATTCCTTCCACCCTCTTCCAAAACTGATTTGAATGGTTGCCAAACTTCTTGTCTAGGAAACTGCTCATGCCTTGCTATGTTCTTCCACAATAGTTCCGGGAATTGTTTCCTGTTGGAAAGGGTAGGAAGCTTCGAGAAATCTGATACAGACTCTGGTTTTGTTTCTTACATTAAGGTCTCGGGTGATGGAGGTAGTGGCACAGGCGCGGGGGGCAGTGGAAGCAGCCATAAACACACCATAATTGTTCTGACTATTGTCATATTAACGGTGCTTGTCATTGCCGGTCTGCTCTGCTTGGGACTCCGATGCTACAGGAAAAGGCAAAAATTGCCTGAGTCTCCTCGAGGGAGTTCAGAAGAGGAAAATTTCTTGGAGAATTTAACTGGAATGCCAGTCCGTTTTAGCTACAAAGATCTGGAAACCGCAACTAAAAACTTTGCTGAGAAGCTCGGGCAAGGGGGTTTTGGCTCAGTTTACAAAGGAGTTCTACCAGATGGGACTGCACTAGCTGTGAAGAAGTTGGAAGGCATTGGCCAAGGGAAGAAAGAGTTCAGGGCTGAAGTTAGCATCATTGGCAGCATTCATCATCTCCATTTGGTGAGGCTTAGAGGATTCTGTGCTGAAGGAACCCATCGGCTTCTTGCTTATGAGTATATGGCAAATGGCTCATTGGATAACTGGATATTCAAGAAAAACAGAGGAGAGTCCCTGTTGGATTGGGATACGAGGTTCAATATAGCTCTGGGAACAGCAAAAGGACTGGCTTACCTGCATGAAGATTGTGCTTCGAAGATTGTCCATTGTGACATCAAGCCTGAAAATGTTCTTGTAGATGATAATTTCCAGGCCAAAGTTTCAGATTTTGGTTTGGCTAAACTCATGACTCGCGAACAAAGCCATGTTTTTACAACACTAAGGGGAACCAGGGGATATCTCGCTCCAGAGTGGATCACAAACTATGCTATCTCAGAGAAAAGTGATGTATATAGCTATGGGATGGTGTTGCTGGAGATAATTGGTGGAAGGAAAAACTATGATCCGACAGAAACTTCGGAGAAATCCCATTTTCCATCTTTTGCTTTTAAGATGATGGAAGAAGGGAAGTTAAAAGATATTCTGGATTCAAAGTTGACAATGAATGAAAATGACGAAAGGTTTCATATAGCTATCAAAGTTGCATTGTGGTGCATACAGGAAGATATGTCTCTGAGACCTCCCATGACCAAAGTTGTTCAAATGCTTGAGGGTCTGTGTACTGTTCCTAAACCACCAACTTGTTCTCCCCTGGGTACTCGCCTTTACTCAACTATATTTAAATCTATCAGCGAAGGTGGCACCTCTTCAGGACCATCAGACTGTAATAGTGATGCTTATCTCTCTGCAGTTCGGCTTTCAGGGCCAAGATAA 2472 0.4333 MEKPRSFIHIIIGTLWLSILVLFEICLAGFQSVGKISPGFQGSQMNWIDKSGMFLVSNSGEFAFGFTTTTNDSTLFLLVIVHSYSDSSRVVWTANRGLPVSNSDKFVFDEKGNSFLQKGGTVVWSTDTQGKGVSSMELQDTGNLVLLGNDSTVIWQSFSHPTDTLLPTQNFTEGMKLISEPSPNNSTYVLEIKSGDVILSAAFQNPQPYWSMQKDNRKIINKDGGTVASASISANSWRFYDANKSLLWQFIFAQDSGTNSTWVAVLGSDSFMTFSNLRREDSSGASPTRIPQSSCSTPEPCDPYYICTGDNNCRCPSVLSSRSNCKTGIVSSCDSSKGPVELMRADDGLNYFALEFLPPSSKTDLNGCQTSCLGNCSCLAMFFHNSSGNCFLLERVGSFEKSDTDSGFVSYIKVSGDGGSGTGAGGSGSSHKHTIIVLTIVILTVLVIAGLLCLGLRCYRKRQKLPESPRGSSEEENFLENLTGMPVRFSYKDLETATKNFAEKLGQGGFGSVYKGVLPDGTALAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVRLRGFCAEGTHRLLAYEYMANGSLDNWIFKKNRGESLLDWDTRFNIALGTAKGLAYLHEDCASKIVHCDIKPENVLVDDNFQAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPTETSEKSHFPSFAFKMMEEGKLKDILDSKLTMNENDERFHIAIKVALWCIQEDMSLRPPMTKVVQMLEGLCTVPKPPTCSPLGTRLYSTIFKSISEGGTSSGPSDCNSDAYLSAVRLSGPR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0696 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Glsi10g0696 823 FunFam Serine/threonine-protein kinase 42 159 - -
Glsi10g0696 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 90 179 IPR036426 -
Glsi10g0696 823 FunFam serine/threonine-protein kinase PBS1-like 468 573 - -
Glsi10g0696 823 SMART serkin_6 499 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0696 823 Pfam Protein kinase domain 502 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0696 823 Gene3D Transferase(Phosphotransferase) domain 1 574 777 - -
Glsi10g0696 823 CDD PAN_AP_plant 331 414 - -
Glsi10g0696 823 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 46 781 - -
Glsi10g0696 823 ProSitePatterns Protein kinases ATP-binding region signature. 505 528 IPR017441 GO:0005524
Glsi10g0696 823 PIRSF SRK 9 819 IPR024171 GO:0004674
Glsi10g0696 823 ProSiteProfiles Bulb-type lectin domain profile. 40 159 IPR001480 -
Glsi10g0696 823 CDD STKc_IRAK 505 772 - -
Glsi10g0696 823 ProSiteProfiles Protein kinase domain profile. 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0696 823 SMART blect_4 46 161 IPR001480 -
Glsi10g0696 823 FunFam S-receptor-like kinase 5 574 778 - -
Glsi10g0696 823 Pfam D-mannose binding lectin 90 172 IPR001480 -
Glsi10g0696 823 Gene3D Phosphorylase Kinase; domain 1 467 573 - -
Glsi10g0696 823 Gene3D - 46 160 IPR036426 -
Glsi10g0696 823 SUPERFAMILY Protein kinase-like (PK-like) 481 770 IPR011009 -
Glsi10g0696 823 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 86 310 IPR011047 -
Glsi10g0696 823 CDD B_lectin 48 161 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0696 Glsi-ChrGlsi10 4448444 4450915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0696 434 779 Receptor kinase-like Gene Family AT5G20050 44.216 1.64e-96 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Glsi10g0696 Pkinase 2.3e-50 CL0016