Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0687 ATGGCTAAAGACGTCACTGCTACTCCACCAGCTGGTTCTTTTGAGTATGAGCTCTTGGGAGATGATCCTGAGAACCTTAGAACTGTCGGAGCCTCATCCAGCCGCACAAGTTCATGGATTGAACCTGAAAGGTTGAAACTTAGACACAGAATTGGTCGAGGACCCTTTGGAGATGTTTGGTTGGCAACTCATCATCAGTCAACTGCAGATTATGATGAGTACCATGACGTTGCTGCCAAGATGTTATATCCAATCAAGGAGGATCATATGAGGATTGTATTAGAGAAATTTGATGAATTGTATTTGAAGTGCCAAGGAGTGACCATGTCTTGCTGGTTACATGGGATTTCAATTTTAAGTGGAAGGATATGCGTCATCATGAATTTCTATGAGGGCTCAATTGGTGACAAAATGGCTAGGCTCAGAGAAGGAAGGATTTCGTTGTATGATGTTTTGAGGTATGGAATCAATCTGGCTCAAGGTATTCTGGAACTTCATTCAAAAGGGATCCTAATTCTCAACCTTAAACCATTTAATGTGCTTCTTGATAATAATGACCAAGCAATTTTGGGAGATTTTGGTATTCCCAGTCTTCTGCTTGGCTTCTCATCCATGAGCTCAGATATGGCTCACAGGCTTGGGACTCCAAATTACATGGCTCCAGAGCAATGGCAACCGGAAGTCAGAGGCCCTATATCTTTTGAGACGGATTCATGGGGATTTGGGTGCACAATTGTGGAAATGTTGACTGGTAATCAGCCTTGGTGTGGGAGATCTGTTGGAGAAATATACCAATTAGTTGTTAAAAAGCATGAAAAACCTCATATTCCAAGTGGCCTTCCTTCTTCAATCGAGAATATCCTAAGTGGATGCTTTGAGTATGATTTGAGGAATCGTCCCTTAATGGCAGACATTCTGGATGTCTTAAAAAGCTCTCTGGATGCATTTGACAATGATGGAGGATGGAAATATCTTGGAACCATGAGAGTTGCTGAAAAATCAAGTAGCACTGGCTACACAGATTGGTTTCTTTCAAAGGATCGTCTTCAAGTGAATGACATGGTACGATCCAGAAAACGGACCAATTCATGCAAACCTCAAAACATGGATGTCCCGGAAGGAACTGTTGTTGGTTTAGAACGCAGTGCAGATCATGGTTTTGTTTTAGTGAGGATCCATGGTATTCATGACCCTTTAAGGATTCATACTTCAACTATAGAGCGTGTCACATTTGGTTTGGCAGCTGGCGATTGGGTACGCTTAAAGGAAGAAGATGAGAAGCACTCACCAGTGGGTATTCTACATTCCATTAGTCGCGATGGTAGAGTGGCTGTTGGATTTATTGGGCTGGAGACTCTTTGGAGAGGAAATTCTTCGGAACTTGAAATGTCAGAGTCTTACTGTGTGGGGCAGTTTGTTAGGCTGAAAGCAAATGTTTTGAGTCCTCGATTTGAATGGCCTCGTAGAAAGGGAGGGGCCTGGACTACTGGAAGAATTTCATGGGTCCTGCCAAATGGGTGTCTAGTAGTCAAATTCCCAGGGATGTTGATTTTTGGGGATGAATCGAGCACCTTCTTGGCTGATCCATCCGAAGTTGAAGTGGTTAATTTTAGTACTTGCCCTGGGATGATAGAGAAGTATCAACATGTAGAGGATCATCACTGGGTAGTCAGACCTGTTCTGATTGCATTTGGCCTGTTTACGTCTGCGAGACTAGGCATATCAATCGGAAAGAAAGTGGGGAGGAATAGGAAGAAGCTGAATGCAAAAGAGAGTGAAAATCAGCATATAGATAGCCAGAATGCTAGCAACCCTGCACGGAAATCTTCTGTTACTATAAATCCTGGCAACACAGCATGGGTTCCTTCAGTTGCTAATATTCTTTTCAGAGAAGGTGTTAGCACACCCACTGGTCGGTAG 1920 0.4307 MAKDVTATPPAGSFEYELLGDDPENLRTVGASSSRTSSWIEPERLKLRHRIGRGPFGDVWLATHHQSTADYDEYHDVAAKMLYPIKEDHMRIVLEKFDELYLKCQGVTMSCWLHGISILSGRICVIMNFYEGSIGDKMARLREGRISLYDVLRYGINLAQGILELHSKGILILNLKPFNVLLDNNDQAILGDFGIPSLLLGFSSMSSDMAHRLGTPNYMAPEQWQPEVRGPISFETDSWGFGCTIVEMLTGNQPWCGRSVGEIYQLVVKKHEKPHIPSGLPSSIENILSGCFEYDLRNRPLMADILDVLKSSLDAFDNDGGWKYLGTMRVAEKSSSTGYTDWFLSKDRLQVNDMVRSRKRTNSCKPQNMDVPEGTVVGLERSADHGFVLVRIHGIHDPLRIHTSTIERVTFGLAAGDWVRLKEEDEKHSPVGILHSISRDGRVAVGFIGLETLWRGNSSELEMSESYCVGQFVRLKANVLSPRFEWPRRKGGAWTTGRISWVLPNGCLVVKFPGMLIFGDESSTFLADPSEVEVVNFSTCPGMIEKYQHVEDHHWVVRPVLIAFGLFTSARLGISIGKKVGRNRKKLNAKESENQHIDSQNASNPARKSSVTINPGNTAWVPSVANILFREGVSTPTGR 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0687 639 CDD STKc_PknB_like 46 311 - -
Glsi10g0687 639 Pfam Protein tyrosine and serine/threonine kinase 45 308 IPR001245 GO:0004672|GO:0006468
Glsi10g0687 639 Gene3D Phosphorylase Kinase; domain 1 26 129 - -
Glsi10g0687 639 Gene3D Transferase(Phosphotransferase) domain 1 131 339 - -
Glsi10g0687 639 SUPERFAMILY Protein kinase-like (PK-like) 42 307 IPR011009 -
Glsi10g0687 639 ProSiteProfiles Protein kinase domain profile. 45 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0687 639 PANTHER OS06G0639500 PROTEIN 1 635 - -
Glsi10g0687 639 MobiDBLite consensus disorder prediction 594 613 - -
Glsi10g0687 639 MobiDBLite consensus disorder prediction 588 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0687 Glsi-ChrGlsi10 4395978 4399490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0687 36 311 MAP Kinase Kinase Kinase AT2G17700 24.643 1.10e-18 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Glsi10g0687 PK_Tyr_Ser-Thr 1.6e-29 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0687 10 4395978 4399490 Glsi10g0687 10 4395978 4399490 ECH