Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0686 ATGGAAGGGAATGTGGATGATCCTGACCGTTGGCAATGGCGTACCAGGCGATCTCGTGATCTAAGAGATGGTATTACGAGACTGAACCAAAAAGATAGACATACCCAGAGGGAGAGGGAGATTGCAGAATCTACCATAGCTGCAACAAAAATGTTTGCAGAAGAGAATGGTCTAAAGGGAGACCCAAGGCTCCAAGCCATCTCCGAAGCCATTAGAGTGGTGCCTCACTTCCCAAAGCAAGGAATCATGTTTCAAGACATAACGACATTGTTGTTGGATCACAAGGCCTTCAAAGACACTGTCGATATCTTTGTCGATCGTTACAGAGACATGGATATTTCCGTTGTTGCCGGAGTTGAAGCTCGAGGATTCATGTTCGGTCCCTCAATTGCTTTGGGCATTGGTGCAAAGTTTGTTCCTTTACGCAAACCTCGAAAGCTGCCAGGTGAAGTGATTTCAGAAAAATATGATCTTGAATATGGAACTGATTGTTTGGAGATGCATGTTGGCGCTGTCCAGCCCGGTGAAAGGGCCTTAGTTATTGATGATTTGGTGGCTACAGGTGGAACTCTATCAGCTGCAATAAGACTACTAGAACGTGTCGGTGCTGAAGTAATTGAATGTGCTTGTGTGATTGGAGTGCCTGAGGTTAAGGGACACTGCAGGCTTAATGGAAAGCCACTATATGTGCTCGTGGAGCCGCGTCGAATGGATAATTCTTTTTGA 726 0.4573 MEGNVDDPDRWQWRTRRSRDLRDGITRLNQKDRHTQREREIAESTIAATKMFAEENGLKGDPRLQAISEAIRVVPHFPKQGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMDISVVAGVEARGFMFGPSIALGIGAKFVPLRKPRKLPGEVISEKYDLEYGTDCLEMHVGAVQPGERALVIDDLVATGGTLSAAIRLLERVGAEVIECACVIGVPEVKGHCRLNGKPLYVLVEPRRMDNSF 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0686 241 Gene3D - 55 234 IPR029057 -
Glsi10g0686 241 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 58 235 - -
Glsi10g0686 241 Pfam Phosphoribosyl transferase domain 106 216 IPR000836 -
Glsi10g0686 241 NCBIfam adenine phosphoribosyltransferase 68 232 IPR005764 GO:0003999|GO:0005737|GO:0006168
Glsi10g0686 241 CDD PRTases_typeI 101 233 IPR000836 -
Glsi10g0686 241 FunFam Adenine phosphoribosyltransferase 1 55 234 - -
Glsi10g0686 241 Hamap Adenine phosphoribosyltransferase [apt]. 67 234 IPR005764 GO:0003999|GO:0005737|GO:0006168
Glsi10g0686 241 SUPERFAMILY PRTase-like 70 227 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0686 Glsi-ChrGlsi10 4389982 4393855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0686 61 233 PRT Gene Family AT1G27450 72.254 3.81e-92 267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0686 10 4389982 4393855 Glsi08g1606 08 11456409 11460104 CCT
Glsi10g0686 10 4389982 4393855 Glsi10g0686 10 4389982 4393855 ECH
Glsi08g1606 08 11456409 11460104 Glsi10g0686 10 4389982 4393855 ECH