Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0659 ATGGGTTTGCTTAATAATGAACTTGGTGAGGCTAATGCATTTTTCAAAGCCCCATTATTCTCTAGTATGTTTGGCAAAATACCTCCTAATGATCATACACGGTTGATTGCTATCACTTACGACCCAACTGATCCACTCAATAAAAGACGCTCCCTCGGAGGAAAGGGATTGTCAGTTAGGGTTTTCGTCTTCGGTGGATTCCCTGTTAAACACTCGGCGCCGTCGATCTCCACAGACGAAGCGAAAATGCCGTCCCACAAGACCTTCATGATCAAGAAGAAATTGGCGAAGAAGATGAGGCAGAACAGGCCTATCCCCTATTGGATCCGCATGAGGACTGACAACACCATCAGGTACAACGCCAAGCGCCGTCACTGGCGTCGCACCAAGCTTGGATTCTGA 402 0.4751 MGLLNNELGEANAFFKAPLFSSMFGKIPPNDHTRLIAITYDPTDPLNKRRSLGGKGLSVRVFVFGGFPVKHSAPSISTDEAKMPSHKTFMIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0659 133 SUPERFAMILY Ribosomal protein L39e 85 132 IPR023626 -
Glsi10g0659 133 ProSitePatterns Ribosomal protein L39e signature. 112 128 IPR020083 GO:0003735|GO:0005840|GO:0006412
Glsi10g0659 133 Pfam Ribosomal L39 protein 91 131 IPR000077 GO:0003735|GO:0005840|GO:0006412
Glsi10g0659 133 PANTHER RIBOSOMAL PROTEIN L39E 75 133 - -
Glsi10g0659 133 FunFam 60S ribosomal protein-like L39 83 133 - -
Glsi10g0659 133 Hamap 50S ribosomal protein L39e [rpl39e]. 83 133 IPR000077 GO:0003735|GO:0005840|GO:0006412
Glsi10g0659 133 Gene3D Ribosomal protein L39e 83 133 IPR023626 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0659 Glsi-ChrGlsi10 4162749 4165419 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0659 83 133 Cytoplasmic Ribosomal Protein Gene Family AT4G31985 92.157 4.20e-30 101