Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0658 ATGGCAAGACCACAACAGAAATACCGAGGTGTCCGACAAAGGAAGCGGGGCCATTGGGTCTCTGAAATTCGCCGACCTCAATTAAAGACTAGGATTTGGCTTGGTACTTTCGAAACGGCAGAAGATGCAGCTAGGGCGTACGATGAAGCAGCAAGGCTAATGTATGGTCCGAGGGCAAGAACCAACTTCCCTTACAATCCCAGTGTGTCTCAGGCATCTTCCAAGCTTCTCTCTGCAACTTTGACTGCAAAACTGCCTAGGTGCTATATGGCTTCGCCGCCAATGACTACACCCTCATTGCCGGAGCCTCAGAGATCAGTAGCTTCACCAAATGTTGTCTCTACAAGCAACTTTGCTGGAAAAAGCAGTGAAACTGAGACAACGTTGGCACACAAGACGCCCCAGGAGGAGCAAGAATCAGAGGTGAACTGA 432 0.4977 MARPQQKYRGVRQRKRGHWVSEIRRPQLKTRIWLGTFETAEDAARAYDEAARLMYGPRARTNFPYNPSVSQASSKLLSATLTAKLPRCYMASPPMTTPSLPEPQRSVASPNVVSTSNFAGKSSETETTLAHKTPQEEQESEVN 143
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0658 143 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Glsi10g0658 143 FunFam Ethylene-responsive transcription factor 2 6 65 - -
Glsi10g0658 143 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Glsi10g0658 143 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Glsi10g0658 143 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Glsi10g0658 143 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Glsi10g0658 143 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Glsi10g0658 143 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Glsi10g0658 143 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 6 138 - -
Glsi10g0658 143 MobiDBLite consensus disorder prediction 93 143 - -
Glsi10g0658 143 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
Glsi10g0658 143 MobiDBLite consensus disorder prediction 101 129 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi10g0658 Glsi-ChrGlsi10 4159771 4160288 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0658 1 92 AP2-EREBP Transcription Factor Family AT5G25190 82.796 1.62e-51 160
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi10g0658 AP2 5.8e-13 CL0081