Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0657 ATGCTTCCTCTATACAAAATCCCAACTGACCCACTAAGTAAAAGGGGCTCCCTCGGAGCAAAGGCTCTGTCAGTTAGGGTTTTCGTCTTCGGTGGATTCCCAGTTAAACACACGGCGCCGTCGATCTCCACGGACGAAGCGAAAATGCCGTCCCACAAGACCTTCATGATCAAGAAGAAATTGGCCAAGAAGATGAGGCAGAACAGGCCTACCCCCTATTGGATCCGCACGAGGACTGACAACACCATCAGGTACAACGCCAAGCGCCGTCGCTGGCGTCGCACCAAGCTTGGATTCTGA 300 0.53 MLPLYKIPTDPLSKRGSLGAKALSVRVFVFGGFPVKHTAPSISTDEAKMPSHKTFMIKKKLAKKMRQNRPTPYWIRTRTDNTIRYNAKRRRWRRTKLGF 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0657 99 Gene3D Ribosomal protein L39e 49 99 IPR023626 -
Glsi10g0657 99 Pfam Ribosomal L39 protein 57 97 IPR000077 GO:0003735|GO:0005840|GO:0006412
Glsi10g0657 99 SUPERFAMILY Ribosomal protein L39e 51 98 IPR023626 -
Glsi10g0657 99 PANTHER RIBOSOMAL PROTEIN L39E 41 99 - -
Glsi10g0657 99 FunFam 60S ribosomal protein-like L39 49 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0657 Glsi-ChrGlsi10 4157739 4159536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0657 49 99 Cytoplasmic Ribosomal Protein Gene Family AT4G31985 88.235 3.21e-28 95.1