Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0639 ATGGCTTTTGAATCAATGGAGGAGAATAACACTCTGTTTGGCCGGTATGAAATGGGTAGGCTTCTGGGCAAAGGGACTTTCGCCAAAGTCTATTACGGCAAACAAATAGCCACCGGCGAGAGTGTTGCAATTAAAGTCATAAGCAAAGACCAAGTGAAGAGAGAGGGGATGATGGAGCAGATCAAGCGCGAGATATCAGTCATGCGCATGGTTCGACACCCAAACATAGTTGAGCTCAAAGAGGTCATGGCCACCAAATCCAAGATTTTCTTCGTCATGGAGTATGTCCGCGGTGGCGAGCTATTCGCCAAGGTCGCCAAAGGCAGACTCAAAGAGGATCTTGCCCGCAAGTACTTCCAACAGTTAATCAGTGCCGTCGACTTCTGTCACAGCAGAGGCGTCTCGCACCGAGACCTCAAGCCTGAAAATTTGTTGCTCGATGAGAACGAGAATCTCAAAGTCTCTGATTTTGGCCTATCGGCGTTGCCGGAACAGCTTCGGTACGACGGTCTCCTCCATACCCAGTGCGGAACTCCGGCATATATTGCCCCTGAAGTGTTGAGAAAGAAAGGGTATGATGGATCGAAGGCTGATATCTGGTCTTGTGGTGTGATTCTATACGCATTACTGGCTGGTTTTCTTCCTTTTCAGGATGAGAACCTTGTGTATATGTACAATAAGGTGTTCAAAGCCGATTTCCAATTTCCTCCATGGTTTTCAGCGGAATCAAGGAGATTGATTTCAAAGATTCTCGTTCCAGACCCAGAGAGACGAGCCTCGATTCCTGCTATAATGCGGGTCCCCTGGTTTCGAAAAGGATTTTCAAGAGCAGCTGCGTTTCAATCTGAAGAATCCGCTACGGACAAAGCCGGTGAATACGTTCTGAAAAGGTCCGAACTTGAAAATTCCGAAACCAAGCTGTCATCGCCCAAGTTTTTCAATGCGTTCGAATTCATTTCGTCAATGTCTTCCGGGTTTGATTTGTCCGGGTTGTTCGAGAACAAGAGGAAAACTGGGTCAATGTTCACGTCGAAGTGTTCAGCCGCGGCAATCATATCAAAGATTGAGACGGTGGCGAAGGGGTTAAGTTTCAAGGTAGCGAAAGTGAAGGACTTTAAAATCAGGCTGCAAGGGACATCGGAGGGAAGAAAGGGGAGGTTGTTTGTGACGGCGGAGGTGTTCGAGGTGGCACCGGAAGTCGCCGTCGTGGAGTTTTCAAAGTCTTCCGGCGACACTTTGGAATATGCCAAGTTTTGCGAGGAAGACGTTAGGCCCGCGCTGAAAGACATCGTTTGGACGTGGCAAGGTGATAGCACGAGCAACGTTAACATCGCCGATGGTTCCGGAGAAGAATGTCAGAAACAATATGACGTGAAAATAAGGCAGAGGTGGAAACGGGAAAGGCGAGAGACAAAGGAGCAATATGACATGGAAAGCAGAGGGGGCGATTTAGATGTGCCTTCATTTTCAGGGGTTCCCACAAGAACTTGTCAATTGTCACACGCGTCAAGCATCCGTTTGAGGCGGGAAAGTTAG 1536 0.4831 MAFESMEENNTLFGRYEMGRLLGKGTFAKVYYGKQIATGESVAIKVISKDQVKREGMMEQIKREISVMRMVRHPNIVELKEVMATKSKIFFVMEYVRGGELFAKVAKGRLKEDLARKYFQQLISAVDFCHSRGVSHRDLKPENLLLDENENLKVSDFGLSALPEQLRYDGLLHTQCGTPAYIAPEVLRKKGYDGSKADIWSCGVILYALLAGFLPFQDENLVYMYNKVFKADFQFPPWFSAESRRLISKILVPDPERRASIPAIMRVPWFRKGFSRAAAFQSEESATDKAGEYVLKRSELENSETKLSSPKFFNAFEFISSMSSGFDLSGLFENKRKTGSMFTSKCSAAAIISKIETVAKGLSFKVAKVKDFKIRLQGTSEGRKGRLFVTAEVFEVAPEVAVVEFSKSSGDTLEYAKFCEEDVRPALKDIVWTWQGDSTSNVNIADGSGEECQKQYDVKIRQRWKRERRETKEQYDMESRGGDLDVPSFSGVPTRTCQLSHASSIRLRRES 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0639 511 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 428 - -
Glsi10g0639 511 FunFam Non-specific serine/threonine protein kinase 7 95 - -
Glsi10g0639 511 Gene3D Kinase associated domain 1, KA1 308 433 - -
Glsi10g0639 511 ProSiteProfiles Protein kinase domain profile. 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0639 511 CDD CIPK_C 314 428 - -
Glsi10g0639 511 ProSiteProfiles NAF domain profile. 308 333 IPR018451 GO:0007165
Glsi10g0639 511 MobiDBLite consensus disorder prediction 469 511 - -
Glsi10g0639 511 Pfam NAF domain 310 368 IPR004041 GO:0007165
Glsi10g0639 511 FunFam Non-specific serine/threonine protein kinase 308 432 - -
Glsi10g0639 511 SUPERFAMILY Protein kinase-like (PK-like) 12 313 IPR011009 -
Glsi10g0639 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Glsi10g0639 511 FunFam Non-specific serine/threonine protein kinase 9 310 - -
Glsi10g0639 511 Pfam Protein kinase domain 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0639 511 SMART serkin_6 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0639 511 Gene3D Transferase(Phosphotransferase) domain 1 96 276 - -
Glsi10g0639 511 Gene3D Phosphorylase Kinase; domain 1 5 95 - -
Glsi10g0639 511 CDD STKc_SnRK3 15 269 - -
Glsi10g0639 511 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0639 Glsi-ChrGlsi10 4022951 4024875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0639 7 452 CBL-interacting serine-threonine protein kinases AT5G10930 70.667 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Glsi10g0639 Pkinase 3.7e-73 CL0016