Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0638 ATGAACTCCAACTCGCATTCAAGGAAGAGAAAGCCTGAAACTCCCAATAATTGTATTGATAATTTGAATGCTGTTATTGAGGGGTCATTCAAACGGCCCAAGGATCACACCCCTGCTAAGGTTTCGAGGGTTCTTGTGCGGACGGAGGCATCTGATACCAGCTTATATGTGAGAGACGGATATCAGTGGAGGAAATATGGTCAGAAGGTCACTAGAGATAACCCCTCTCCTAGGGCTTACTTCAGGTGCTCCCTCGCCCCAAGCTGCCCAGTGAAAAAGAAGGTGCAAAGAAGTGCAGAGGACCCAACTGTGTTGGTGGCAACTTACGAAGGAGAGCACAACCACGTGCAACGAACCAAATTATCACTGGGTTCCAGCCAAAGCGAAGTCCTTGATTCAGTTCCCGGTCTGTCAGCGCCGACGGTGACCCTTGACCTGGTTCAGCAGTCAGGATTGGTTGAGAATGATCACAAGTCCATCCGGCAGCTTTTGGTTCAACAAATGGCTACTTCTTTGACTAGAGATCCCTATTTCACATCAGCTCTGGCTACGGCCATTTCGGGAACAATTTTAGATCGCACTACCCAGAACAAATAG 597 0.4841 MNSNSHSRKRKPETPNNCIDNLNAVIEGSFKRPKDHTPAKVSRVLVRTEASDTSLYVRDGYQWRKYGQKVTRDNPSPRAYFRCSLAPSCPVKKKVQRSAEDPTVLVATYEGEHNHVQRTKLSLGSSQSEVLDSVPGLSAPTVTLDLVQQSGLVENDHKSIRQLLVQQMATSLTRDPYFTSALATAISGTILDRTTQNK 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0638 198 FunFam WRKY transcription factor 40 42 119 - -
Glsi10g0638 198 SUPERFAMILY WRKY DNA-binding domain 54 115 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi10g0638 198 ProSiteProfiles WRKY domain profile. 59 115 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi10g0638 198 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 22 190 IPR044810 GO:0003700
Glsi10g0638 198 SMART WRKY_cls 57 117 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi10g0638 198 Pfam WRKY DNA -binding domain 59 115 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi10g0638 198 Gene3D WRKY domain 40 117 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0638 Glsi-ChrGlsi10 4013082 4013932 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0638 39 194 WRKY Transcription Factor Family AT2G25000 58.385 1.06e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi10g0638 WRKY 7.5e-24 CL0274