Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0637 ATGGTCGAAAAGGCGGAAGCGCTTCAAGCGGAGTTGAAACATGTGAAGGAGGAGAATAATGCTCTAAGAGTGATGCTCGAAGTTCTGAGCTGCAAATACAGAAAGCTTCAGTCCCAACTTCAAGAGAAAAGCGCAGAGCAGATGAGCGTCGATTTAAAGCAAAGCGGGTCAGTAATTAGTTACGACACAAACAAGAGACCAAGAATTGAGTTTCCAATAGCACATAAGCCAGTGCAAATCTTTGCCAGAACTCACCCAAAGGACAATAGTTTGATGGTAAAAGATGGCTATCAATGGAGGAAGTATGGTCAGAAGGTTACCAAAGACAATCCATCGCCCCGAGCTTACTTCAGATGCTCCATGTCTCCCAGCTGCCCAGTCAAAAAGAAGGTACAAAGATGCATACAAGATAGGTCCATCCTTGTTGCAACTTATGAAGGCGAGCACAACCATGGCATTCTTGATTACTCGGTGTCACCATCTTCTTCTACCCCGAGAGGCTCAACGTCTGATTTACCTCTCCCAGTCAATGCTGACGAATCAGAAGCGACCAACATTGATCTTGTGCTTCCTCGTTGGGCTCAAACAGATCACAGAAGACACATTGAAGACCATGGTAGCCACAGCAAAATTGAAGAATATGTGGGTTCTCTAATCAAAGATCCTAACTTTACCGTAGCATTAGCTGAAGCAGTTGCCCGCTCCATCACTTGCCAGCGTAAGCAACAACAAGAACTCGACCTTAATTTGAGTGTTGCAGAAGTATGA 768 0.4492 MVEKAEALQAELKHVKEENNALRVMLEVLSCKYRKLQSQLQEKSAEQMSVDLKQSGSVISYDTNKRPRIEFPIAHKPVQIFARTHPKDNSLMVKDGYQWRKYGQKVTKDNPSPRAYFRCSMSPSCPVKKKVQRCIQDRSILVATYEGEHNHGILDYSVSPSSSTPRGSTSDLPLPVNADESEATNIDLVLPRWAQTDHRRHIEDHGSHSKIEEYVGSLIKDPNFTVALAEAVARSITCQRKQQQELDLNLSVAEV 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0637 255 Coils Coil 5 46 - -
Glsi10g0637 255 SMART WRKY_cls 93 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi10g0637 255 SUPERFAMILY WRKY DNA-binding domain 90 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi10g0637 255 Gene3D WRKY domain 80 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi10g0637 255 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 5 50 IPR044810 GO:0003700
Glsi10g0637 255 ProSiteProfiles WRKY domain profile. 88 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi10g0637 255 Pfam WRKY DNA -binding domain 94 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0637 Glsi-ChrGlsi10 4006301 4007706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0637 7 233 WRKY Transcription Factor Family AT1G80840 38.462 7.51e-46 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi10g0637 WRKY 1.5e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0637 10 4006301 4007706 Glsi08g1656 08 11804769 11808739 CCT