Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0628 ATGAAGAACTCCACCGGGACTGTGTCCAGGGGTCTCTTGGAGGCTTCAACTCCTGCTGCTTTTACTTCCTCTGGACTCATTTTGTGCGTGTCTGCCATTTTCCTCCAATCTTCCTCTCCACCCATGGATACCTTACTCCGACTTCTGTGTGTTGCCACTTTGCCTCAAAACAGGAGAACAGAGGAACCAACATTAATTGCCACGTCTATCAGAAAGTGGTCGTCTTCCGCACATGACGCTCCCACACCCCTCTTTCAATTATCCGAATCCATGGCTGGTCTTTCAAGAGCTGCCTTAGCTTCTCTTTCCCTTCTATTTCTTCTCTTTGGCTTCTCTGCAGCTAAGGAAATCTTGGTTGGAGGCAAGAAAGGTGCGTGGAAGATACCATCTTCTGAATCAGACTCTCTCAACCAATGGGCAGAACGGTCCCGTTTCCATGTCGGCGATCATCTTGTCTGGAAATATGACGGTGGGAAAGACTCAGTTTTGCAAGTAAGCAGGGAAGATTATGCTAACTGCAGTACTTCCAACCCCATTAGAGAGTACAACGACGGAAACACTAAAGTGAAGCTTGACCGTCCTGGGTCATTCTACTTCATTAGTGGAGCAAAGGGGCACTGTGAGGAGGGCCAAAAGCTCACTGTAGTGGTTCTGACTCCAAAGCGCAGGTTCACCGGGATTTCTCCAGCACCTTCTCCGACAGAGCTCGAAGGTCCAGCTGTTGCTCCCACCAGCAGTGCCTCAGTTTTGCGAGGTAGCCTTATGGCGGCTCTGGGAGTATTGACTATGTGGGCTTTCTGA 801 0.4969 MKNSTGTVSRGLLEASTPAAFTSSGLILCVSAIFLQSSSPPMDTLLRLLCVATLPQNRRTEEPTLIATSIRKWSSSAHDAPTPLFQLSESMAGLSRAALASLSLLFLLFGFSAAKEILVGGKKGAWKIPSSESDSLNQWAERSRFHVGDHLVWKYDGGKDSVLQVSREDYANCSTSNPIREYNDGNTKVKLDRPGSFYFISGAKGHCEEGQKLTVVVLTPKRRFTGISPAPSPTELEGPAVAPTSSASVLRGSLMAALGVLTMWAF 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0628 266 FunFam Early nodulin-like protein 1 114 222 - -
Glsi10g0628 266 Pfam Plastocyanin-like domain 126 211 IPR003245 GO:0009055
Glsi10g0628 266 PANTHER BLUE COPPER PROTEIN 116 233 IPR039391 GO:0009055
Glsi10g0628 266 Gene3D - 113 221 IPR008972 -
Glsi10g0628 266 SUPERFAMILY Cupredoxins 114 218 IPR008972 -
Glsi10g0628 266 ProSiteProfiles Phytocyanin domain profile. 115 219 IPR003245 GO:0009055
Glsi10g0628 266 CDD OsENODL1_like 115 218 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0628 Glsi-ChrGlsi10 3946145 3947532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0628 95 266 Phytocyanin Superfamily AT4G31840 53.714 7.14e-63 193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0628 10 3946145 3947532 Glsi10g0628 10 3946145 3947532 ECH