Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0607 ATGGAGACAAGATCGCTAGTTTATCCCACAATAGTTTCAACTCTTCTTGGCTTCTCTTTTGCTTTGTCCGTTTCAGCCAGCCTCTCTTTCAATTTCTATGCAGCTTCATGCCCATCAGCAGAGTTTATTGTAAGAAACACAATCCGTTCAATCTCTTCTACGGATCCCTCCATTCCTGGAAAGCTCCTTCGCCTGGTTTTCCACGATTGCTTCGTGGAGGGATGTGATGCGTCTGTGATGCTACAAGGGAATAATACAGAGCAAAGTGATCCGGGCAATAGGTCTGTTGGAGGATTTTCAGTGGTAGATTCAGCAAAACGAGTCCTTGAGATATTTTGTCCTGAAACTGTTTCTTGTGCTGACGTAATTGCTCTGGCTGCTAGAGATGCCGTTGAGATTGTTGGTGGACCCGTGATTCAGATTCCCACGGGTAGGAGAGATGGAATGGTTTCAGCAGCTTCAAATGTCAGACCCAACATCGTGGACACAAGTTTCACAATAGATGAGATGATTAAGCTCTTTTCCTCTAAAGGATTGTCCATTGACGATCTTGTCATCCTTTCAGGAGCTCACACCATAGGATCAGCTCATTGCAGCTCATTCAGGGATCGCTTCCAGGAAGACTCCAAGGGAAAGCTTAGGCTTATTGACAAAGCCCTTGACAGTGGCTATGCAAATGAGCTAATGGAACATTGTCCAGCGGGTGCAACCCCGTCTGTCACAGTTGACAATGATCCTGAAACACCGATGGCGTTTGACAACCAGTATTACCGAAACCTTGTGGCCCACAAAGGGCTATTCCAGTCGGATTCTGTTCTGTTGAAGGATGACAAAACAAGGAAATTAGTAGAGGCTTTGGCAAACGACCAAGACCTTTTCTTTGAAAAATGGGGCCAGTCCTTCTTGAAGCTCACCGGTATTGGAGTCAAAACAGGTGAAGAGGGGGAAGTTCGACGTTCTTGTTCAGTAACTAATGCATAA 981 0.4557 METRSLVYPTIVSTLLGFSFALSVSASLSFNFYAASCPSAEFIVRNTIRSISSTDPSIPGKLLRLVFHDCFVEGCDASVMLQGNNTEQSDPGNRSVGGFSVVDSAKRVLEIFCPETVSCADVIALAARDAVEIVGGPVIQIPTGRRDGMVSAASNVRPNIVDTSFTIDEMIKLFSSKGLSIDDLVILSGAHTIGSAHCSSFRDRFQEDSKGKLRLIDKALDSGYANELMEHCPAGATPSVTVDNDPETPMAFDNQYYRNLVAHKGLFQSDSVLLKDDKTRKLVEALANDQDLFFEKWGQSFLKLTGIGVKTGEEGEVRRSCSVTNA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0607 326 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0607 326 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0607 326 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0607 326 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0607 326 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0607 326 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0607 326 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0607 326 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0607 326 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0607 326 Gene3D Peroxidase, domain 2 161 304 - -
Glsi10g0607 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Glsi10g0607 326 ProSiteProfiles Plant heme peroxidase family profile. 27 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0607 326 FunFam Peroxidase 161 304 - -
Glsi10g0607 326 PANTHER - 14 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi10g0607 326 Pfam Peroxidase 44 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0607 326 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0607 326 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0607 326 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0607 326 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0607 326 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g0607 326 FunFam Peroxidase 31 171 - -
Glsi10g0607 326 SUPERFAMILY Heme-dependent peroxidases 28 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi10g0607 326 Gene3D - 31 325 - -
Glsi10g0607 326 CDD secretory_peroxidase 28 324 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0607 Glsi-ChrGlsi10 3825672 3827433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0607 10 325 Peroxidase AT4G31760 63.924 2.84e-159 446