Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0605 ATGATAACTTGGAATAATTGGCACGCGAGCATAGGCTATACATACGCTATACTGTTTTTGTTTCTTCATTTTCTCATATTGATCAAAGGCATACTATCTGTAAACCCTGAATATTCAAGCTTCGAAATGGGATATCTCAATTCAGTTTTGTCCTCTTCAAGCCAGGTCCATGCTGATGAAGATGCACCTATAAGCGGCGGGGGCCTCAGTCAGAACGCCAAGTTCAGCTATGGATATGCTAGCTCTCCTGGTAGGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGATGGTGTTGATGGTGAAATCGTTGGCCTTTTTGGAGTTTTTGATGGTCACGGTGGTGCTCGGGCTGCTGAGTACGTCAAGCAAAACCTCTTTAGTAATTTGATCAAACACCCAAAATTTATTTCTGACACCAAATCAGCTATAGCTGATGCATATAACCATACGGACTCTGAATTTCTGAAATCAGAAAATAGTCAAAATAGAGATGCTGGATCAACCGCTTCCACTGCCATCCTAGTTGGTAACCGTTTGCTTGTTGCAAATGTTGGGGACTCCAGAGCTGTCATATGCAGGGGTGGTACAGCCATTGCTGTTTCTCGAGATCACAAGCCAGACCAAACTGATGAGAGGCAAAGAATTGAAGATGCAGGGGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGTGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGGAAGAAAAAATTGACAGCTCTCTCGAGTTTCTTATATTAGCCAGTGATGGGCTATGGGATGTTGTCTCAAATGAGGAAGCCGTTGCTTTGATTAAACCAATTGAGGATGCAGAGGAGGCAGCAAAGAGACTGACTCAGGAAGCATGTCAGAGAGGTAGTGCTGACAATATCACCTGTGTTGTTGTTCGCTTCTTGATGAATCAAGATGCTTCTTCTTGTAGTGCTCCGGGTAATTGTCCTTCAGCGGAAGGGTAA 1029 0.4354 MITWNNWHASIGYTYAILFLFLHFLILIKGILSVNPEYSSFEMGYLNSVLSSSSQVHADEDAPISGGGLSQNAKFSYGYASSPGRRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGARAAEYVKQNLFSNLIKHPKFISDTKSAIADAYNHTDSEFLKSENSQNRDAGSTASTAILVGNRLLVANVGDSRAVICRGGTAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDSSLEFLILASDGLWDVVSNEEAVALIKPIEDAEEAAKRLTQEACQRGSADNITCVVVRFLMNQDASSCSAPGNCPSAEG 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0605 342 ProSiteProfiles PPM-type phosphatase domain profile. 76 322 IPR001932 -
Glsi10g0605 342 SMART PP2C_4 66 320 IPR001932 -
Glsi10g0605 342 SUPERFAMILY PP2C-like 70 322 IPR036457 -
Glsi10g0605 342 CDD PP2Cc 75 322 IPR001932 -
Glsi10g0605 342 ProSitePatterns PPM-type phosphatase domain signature. 107 115 IPR000222 GO:0043169
Glsi10g0605 342 SMART PP2C_SIG_2 87 322 IPR001932 -
Glsi10g0605 342 FunFam probable protein phosphatase 2C 59 68 326 - -
Glsi10g0605 342 Gene3D - 67 328 IPR036457 -
Glsi10g0605 342 PANTHER PROTEIN PHOSPHATASE 65 321 IPR015655 GO:0004722|GO:0006470
Glsi10g0605 342 Pfam Protein phosphatase 2C 103 315 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0605 Glsi-ChrGlsi10 3812050 3816589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0605 43 342 PP2C-type Phosphatase Gene Family AT4G31750 87.333 0.0 531