Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0603 ATGAAGGAGCATTTTTCAAAACTTGTTTACCCTCTGCTCCTGTTTATCTGGACTCTATGTTGTTTTCTGGGCGTGGCAACGAGAAACGGAACTGTTCCAGTGAAAGTGGGAATCTTACTTGATCTTGCCTCAATCCCTGGTAAGATGGGGTTGAGCTGCATCGACATGTCCCTTTCTGACTTCTATCTTTCTCATTCTCATTACAAAACTAGGCTACTCTTCAACATCAGGGACTCCCACACGGACGTCGTTACTGCTGCAGCTCAAGCATTAGATCTCATAAAAACAGAGCAAGTGCAAGCCATAATAGGGCCAATGACATCAATGCAGGCCAACTTTGTGATCAGTCTTGGAGACACAGCTCGTGTGCCCATCTTAACCTTTTCGGCAACAAGTCCTTCTCTTGCTTCGCTAAGGAGTGCATATTTTTTTCGAATTGCACAAAGCGATTCAGCTCAAGTGAATGCCATTGGCGCAATCCTCCAAGCTTTTGGGTGGAAAGGAGCAGTGCCCATTTACGTAGACAATAATTATGGGGAGGGAGTGATACCCTTCTTAACCAATGCTCTGCAACAAGTCAATGCTCGCATCCCCTATCTTAGTTCCATTTCTCCTTCTGCCACAGATGAAGACATTAGAGGAGAGCTCTACAAGTTGATGACCATGCAAACCAGAGTCTTCGTCGTTCATGTGTCTGCTGATCTCGGCTCTAGACTCTTGATTATAGCACAACAGATTGGAATGATGAGACAGGGATACGTTTGGATCTTAACAGATGGTGTGGCTAGTATATTAACATCCTTGAATTCCTCAGTTATAGAATCAATGCAAGGTGTTTTGGGTGTGAGGACGTATATTCCCAAAACAAAAGAGCTTGATGAATTTAAAGTTCGATGGAAAAGAAAATTCCTGCAAGACAATCTAACCCATATTGGTACAAATTTGAATGTATTTGGAGTATGGGCTTATGATGCTACCACAGCACTAGCAATGGCTGTGGAGAAGGTCAGCACCAACAATCTTGGCTTTGATAGGAGCAATGCTTCTGGCAATTTAACTGATCTTGAAAGGTTGGGAGTTTCAAAAAATGGTGAAAATCTGCGGGAAACTTTATCGAGCACTAAATTTAGAGGCCTCGGTGGAGAGTTTAATGTCGTTGATGGGCAATTACAAGCATCGACGTTCGAGATAATAAATGTGATTGGTAATGGGGAAAGAAGGATAGGATTTTGGACATCAAAGAATGGATTGGTCAGAAATCTGGATTCAACAAACACAAGCATATATTCTACATCTAAAAACAATCTAGGTTCGATTATATGGCCAGGGGATAGTTACTCTGTTCCAAAGGGTTGGGGCATTCCTACAAATGAGAAAAAGCTGAGGATAGGAGTTCCAGTGAAAAATAGTTATACTGAATTCGTAAAAATAAATAGTGACCCAAGTGCTAATACAACAGAGGTGAGTGGGTACTGTATCGACGTGTTCAAGGCAGTGCTAGAAGTGTTGCCATATGCCGTGCCATATGAGTTTATCCCATTTGCAAAACCCAATGGTGAGAGTGCAGGAACATACAGTGAGCTGATCAGCCAAGTTTATTATGGGAACTTCGATGCGGTGGTAGGGGATACAACAATTTTAGCAAACAGGTCCAACTACGTGGATTTCACATTGCCATACACAGAATCTGGGGTAGCTATGGTGGTTCCAGTGAAATACGACAGGAAGAAGAATGCGTGGGACTTCTTAAAGCCATTGACATGGGATCTTTGGGTTACAACCTCTTGTTCGTTTGTATTCATAGGATTTGTTGTGTGGGTGGTTGAACACCGAATAAACGAAAATTTCAGAGGGCCTCCTTTGCATCAGATAGGCACCAGCTTATGGTTTTCTTTCTCAACCATGGTGTTTGCCCATCGAGAGAGAGTGGTGAGCAACTTGGGTAGATTTGTTGTGATCGTATGGATTTTCGTGGTCCTAATTCTGGTTGAAAGCTATGCTGCGAGTCTGACGACGCTCTTAACTGTTGAGCAGCTCCGTCCTACTCTGACAGAAGTGAACCAAGTTATAAAGGATAGGCTGAATGTTGGTTGCGTGAAAAATTCTTTTGTGGAAAAAATTCTGAAGGAGATGGGTGTTGCAGATTACCAGTTCAAATCCTTTAATACGACAGAAGAGTGCCATGAGCTTTTCGAAAAAGGAAGTGCAAATGGTGGCATAGCTGTTGCGTTTCGTGAAATTCCTTACGTGAAACTCTTTCTTGGAACTTACTGCTCCAAATATGCCATGGTGGGACCAACATTTAAAACTGGGGGTTTTGGATTTGTTTTTCCTAAAGGTTCTCCTTTTGTAGCTGACATTTCAAGAGCAATCCTGAATTTGAGCGAAGGAGATAAAATGAGAACAATTGAGAACGCATGGTTGAAGAAAAACAGTTGTGAGGAGAGTGGTGCCGTGGTTTCTTCTAATAGTCTGGCTCTCGAAAGCTTCTGGGGCCTATTTCTGATTGCAGGGGTTGCTTCAATTTTAGCATTGATTATCTTCGCCATTACATTCCTATATGGGCACAGACAAATCTGGTTACGCTGTGATCCCAATACTTCAAGATGGAGACAAATTGGGATGTTGATAAGGATGTTTGACCAGAGGGAACTCAACTCTCATACTTTCAAGAAAAGTGAAAAGGCAGTTGAGGCCACCCCAACAACGAATTGCCCCCCAAGTCTCTCCAGTCGAAGTGATTCTTACTTTTCCTTTTATGGAGACCAAGAAACGTTCGCTGCAGACTTTGATGAGGTTAATCCAAATGGCCGTGGACCCCAAGACCTACAAATAACCATAATGCAAAATATACCATCTGCCACTACTACTACTCTAGTTCCGGAAGTGGCCCCAGGAACAGGAAGCAACTCTTTAAGACATTCTACATTTGCTTTCTTCCTACCCACTGGATATAGACACCAAGAAAGTGGGAATCGTACTCGATCTTGTCTCGGCCACTGACACATCTGGTTACGCTATGATTCCGATACTTCAAAATGGAAACAAACTGGAATGTTGCTGAGGATGTTTAACCAAAGAGACCATAGTTCTCACACTTTGAGGAAAAGTGAAACTCGTAGGAGGCATGGTCAAGATTTGGGTGGAGTTGAGGTTGAGGTTCAGGCCTCCCCAACTGCACACGGCTCCCCAAGTCCCTCTAGTACAACGTATGGTGATGCTAATCCAAATGGGCATGCACTTCAGGACATAGAAATAACCATAATGCAAAATATACCATCTGCCGGTACTTGTACTCCACAACTGGCCTCAGCAGCCTAA 3321 0.4303 MKEHFSKLVYPLLLFIWTLCCFLGVATRNGTVPVKVGILLDLASIPGKMGLSCIDMSLSDFYLSHSHYKTRLLFNIRDSHTDVVTAAAQALDLIKTEQVQAIIGPMTSMQANFVISLGDTARVPILTFSATSPSLASLRSAYFFRIAQSDSAQVNAIGAILQAFGWKGAVPIYVDNNYGEGVIPFLTNALQQVNARIPYLSSISPSATDEDIRGELYKLMTMQTRVFVVHVSADLGSRLLIIAQQIGMMRQGYVWILTDGVASILTSLNSSVIESMQGVLGVRTYIPKTKELDEFKVRWKRKFLQDNLTHIGTNLNVFGVWAYDATTALAMAVEKVSTNNLGFDRSNASGNLTDLERLGVSKNGENLRETLSSTKFRGLGGEFNVVDGQLQASTFEIINVIGNGERRIGFWTSKNGLVRNLDSTNTSIYSTSKNNLGSIIWPGDSYSVPKGWGIPTNEKKLRIGVPVKNSYTEFVKINSDPSANTTEVSGYCIDVFKAVLEVLPYAVPYEFIPFAKPNGESAGTYSELISQVYYGNFDAVVGDTTILANRSNYVDFTLPYTESGVAMVVPVKYDRKKNAWDFLKPLTWDLWVTTSCSFVFIGFVVWVVEHRINENFRGPPLHQIGTSLWFSFSTMVFAHRERVVSNLGRFVVIVWIFVVLILVESYAASLTTLLTVEQLRPTLTEVNQVIKDRLNVGCVKNSFVEKILKEMGVADYQFKSFNTTEECHELFEKGSANGGIAVAFREIPYVKLFLGTYCSKYAMVGPTFKTGGFGFVFPKGSPFVADISRAILNLSEGDKMRTIENAWLKKNSCEESGAVVSSNSLALESFWGLFLIAGVASILALIIFAITFLYGHRQIWLRCDPNTSRWRQIGMLIRMFDQRELNSHTFKKSEKAVEATPTTNCPPSLSSRSDSYFSFYGDQETFAADFDEVNPNGRGPQDLQITIMQNIPSATTTTLVPEVAPGTGSNSLRHSTFAFFLPTGYRHQESGNRTRSCLGHXHIWLRYDSDTSKWKQTGMLLRMFNQRDHSSHTLRKSETRRRHGQDLGGVEVEVQASPTAHGSPSPSSTTYGDANPNGHALQDIEITIMQNIPSAGTCTPQLASAA 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0603 1106 SUPERFAMILY Periplasmic binding protein-like II 438 811 - -
Glsi10g0603 1106 FunFam Glutamate receptor 324 459 - -
Glsi10g0603 1106 MobiDBLite consensus disorder prediction 1058 1076 - -
Glsi10g0603 1106 Pfam Ligand-gated ion channel 810 840 IPR001320 GO:0015276|GO:0016020
Glsi10g0603 1106 Gene3D - 154 318 - -
Glsi10g0603 1106 Gene3D - 460 578 - -
Glsi10g0603 1106 Gene3D - 64 153 - -
Glsi10g0603 1106 FunFam Glutamate receptor 2.7 716 815 - -
Glsi10g0603 1106 FunFam Glutamate receptor 579 709 - -
Glsi10g0603 1106 MobiDBLite consensus disorder prediction 1030 1079 - -
Glsi10g0603 1106 CDD GluR_Plant 459 808 - -
Glsi10g0603 1106 SMART GluR_14 462 810 IPR001320 GO:0015276|GO:0016020
Glsi10g0603 1106 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 34 892 IPR015683 -
Glsi10g0603 1106 SUPERFAMILY Periplasmic binding protein-like I 33 443 IPR028082 -
Glsi10g0603 1106 Gene3D - 579 717 - -
Glsi10g0603 1106 FunFam Glutamate receptor 460 579 - -
Glsi10g0603 1106 MobiDBLite consensus disorder prediction 1030 1048 - -
Glsi10g0603 1106 CDD PBP1_GABAb_receptor_plant 35 421 IPR044440 -
Glsi10g0603 1106 FunFam Glutamate receptor 155 312 - -
Glsi10g0603 1106 Gene3D - 360 459 - -
Glsi10g0603 1106 Gene3D - 758 815 - -
Glsi10g0603 1106 Pfam Receptor family ligand binding region 53 402 IPR001828 -
Glsi10g0603 1106 Pfam Bacterial extracellular solute-binding proteins, family 3 485 809 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0603 Glsi-ChrGlsi10 3791780 3798710 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0603 8 903 Ion Channels AT2G29120 52.058 0.0 912