Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0602 ATGAAGACGCATCCTGCTAAACTTGTTCATGCCATTGCCCCTATCTTCTGTTTGTCTCTATTTCTAAGTTTCTACGTGGGGCTGGCACAAAGGAATACCACTGTCCCAGTCAAAGTGGGAGTTGTGCTTGATCTTGCCACAACAAGTGGGAAGATTGGATTCAGCTGCATCAACATGGCTCTCTCTGACTTCTATAGCTCTCATTCACATTACAACACCAGGCTTATCTTCAACATCAGGGACACCATGAAAGACGTCGTTACTGCAGCTGCTCAAGTTATTTTGGCTTCACAGAAGTTCGATGTCGTGGTGGGGGATACAGCAATCATAGCAAACAGGTCCAACTATGTGGATTTCACATTACCCTACACAGAATCTGGCGTAACAATGCTTGTTCCAGTGAAAGACGACAGGAAGAAGAATGCGTGGGCCTTCTTAAAGCCATTGACATGGGATCTTTGGGTAACAACCGCTTGTTCGTTCGTATTCTTGGGATTTGTTGTGTGGGTGCTTGAACACCGAATAAACGAAAATTTCAGGGGTCCTCCGTCGCATCAGATTGGCACCAGCTTATGGTTCTCTTTCTCAACCATGGTGTTTGCCCATCGAGAGAAAGTGGTGAGCAATTTGGGTAGATTTGTGGTGATCATATGGGTTTTTGTGGTTCTAATTCTGGTTCAAAGTTATACTGCAAGTCTGACGTCACTCTTGACTGTTGAGCAGCTCCGCCCAACTCTGACCGATGTCAATCAACTTATAAAGGATAGGCTGAATGTTGGTTACCTAGAAGGTTCCTTTGTATATGAAATATTGAAGGACATGGGTTTCCAAGATTATCAGCTCAAGATATATAATTCTACTGAGGATTGCAATGAGCTTTTCCAACGAGGAAGTGCAAATGGTGGTATTGCTGCTGCGTTCGATGAAATTCCTTACGTGAAACTGTTTCTTGGAACTTACTGCTCTAAGTATGCCATGGTAGGATCAACTATTACAACCGGCGGCTTTGGATTTGTCTTCCCTAAAGGCTCCCCTCTTGTAGCTGACATTTCAAGGGCAATCCTAAATGTGACTCAGGGAGATAAAATGAAAACAATTGAGAACGCATGGTTCAAGAAAAGTAATTGCCCACAGCCTGATGCCCCAATTTCTTCTGATAATCTAAGCCTTGATAGCTTCTGGGGCCTATTCCTTATAGCCGGGGTTGCTTCCGTTTCAGCTCTCTGCATCTTTGCAGTTACATTCCTATGTCAGCATAAGCATGTATGGCTGCACTATAATCCTAACACTCCAATACGGAAACGAATTAGTGTGTTGCTTAGAATGTTTGACCAAAAAGACCTGAGCTCCCACGCATTTAGAAAAAGTGAAATTAGCAGTGCACATCATCGGTTTGGTGCAACTGAGTCGTCTCCTGGTACAGGTACTCACTCCCCACCAAGTCCGTCTAGTCAAACGGAATCAAACTCCTCATTTTACAGAGACCAAGCAGTGTTTTCCGCGGACAATGGAGATTTTCATCCTTATGCTCATGCACCTCAAGACATGGAGGTAAGAATGGCGCAAAATGTCCTGCCTCCCACCACTCTACCACCAGACCCTGCAGACAACCGATAA 1617 0.4447 MKTHPAKLVHAIAPIFCLSLFLSFYVGLAQRNTTVPVKVGVVLDLATTSGKIGFSCINMALSDFYSSHSHYNTRLIFNIRDTMKDVVTAAAQVILASQKFDVVVGDTAIIANRSNYVDFTLPYTESGVTMLVPVKDDRKKNAWAFLKPLTWDLWVTTACSFVFLGFVVWVLEHRINENFRGPPSHQIGTSLWFSFSTMVFAHREKVVSNLGRFVVIIWVFVVLILVQSYTASLTSLLTVEQLRPTLTDVNQLIKDRLNVGYLEGSFVYEILKDMGFQDYQLKIYNSTEDCNELFQRGSANGGIAAAFDEIPYVKLFLGTYCSKYAMVGSTITTGGFGFVFPKGSPLVADISRAILNVTQGDKMKTIENAWFKKSNCPQPDAPISSDNLSLDSFWGLFLIAGVASVSALCIFAVTFLCQHKHVWLHYNPNTPIRKRISVLLRMFDQKDLSSHAFRKSEISSAHHRFGATESSPGTGTHSPPSPSSQTESNSSFYRDQAVFSADNGDFHPYAHAPQDMEVRMAQNVLPPTTLPPDPADNR 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0602 538 Gene3D - 272 378 - -
Glsi10g0602 538 SUPERFAMILY Voltage-gated potassium channels 153 243 - -
Glsi10g0602 538 CDD GluR_Plant 35 371 - -
Glsi10g0602 538 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 97 454 IPR015683 -
Glsi10g0602 538 Gene3D - 142 271 - -
Glsi10g0602 538 MobiDBLite consensus disorder prediction 463 538 - -
Glsi10g0602 538 FunFam Glutamate receptor 2.7 279 378 - -
Glsi10g0602 538 FunFam Glutamate receptor 142 272 - -
Glsi10g0602 538 SUPERFAMILY Periplasmic binding protein-like II 95 374 - -
Glsi10g0602 538 MobiDBLite consensus disorder prediction 463 497 - -
Glsi10g0602 538 Pfam Ligand-gated ion channel 373 403 IPR001320 GO:0015276|GO:0016020
Glsi10g0602 538 Gene3D - 72 141 - -
Glsi10g0602 538 SMART GluR_14 62 373 IPR001320 GO:0015276|GO:0016020
Glsi10g0602 538 Pfam Bacterial extracellular solute-binding proteins, family 3 95 372 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0602 Glsi-ChrGlsi10 3781773 3790830 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0602 100 502 Ion Channels AT2G29120 54.950 1.37e-144 438