Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0591 ATGGTAAAGCCGTCCATGGCTACTCCTAATACCGCAGACACTCCTTCGGACCAAACTCTCAAAACTGACTCTTCCAAGTACAAAGGCGTTAGAAAGCGAAAATGGGGCAAATGGGTGTCTGAAATTAGGCTTCCCAATAGCCGTGAACGCATATGGTTAGGCTCTTACGACACTCCGGAGAAGGCCGCTCGAGCCTTCGATGCGGCCCTTTATTGCCTACGTGGCTGCCATGCCAATTTCAATTTCGCTCACACCCCCGTCGAGATTAATGTTTCTCCCGATCAATCCCTTACTCACCAGGAAATTCAAGAGCTTGCTGCTAGGTTTGCCAACGAACACCAGGATCCACCTCTTGAACAGTCTTCAGAACCTGCTCCTTCTTCCTTTGAGTCCAATAGGGTTACTGATGGGACTGTCCAAGTGGACCATGGGGACATAAGGAGCATAGATTGGTCGTTTTTGAACTCCTTGGATAATTCCAATGAGGTTGCCTCTGGTAATTATAATGACCTCTATTATGAGCTAGACAAGATGCACTCTGGGGAGTTATATCCCACTTCGCCACCTCATTTACTCGATAATGGGGACCCTAACGAAGGTGATGATGCTTTTTCACAGCAATCATTAATCCTTTGGAACTTTTGA 645 0.4698 MVKPSMATPNTADTPSDQTLKTDSSKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGCHANFNFAHTPVEINVSPDQSLTHQEIQELAARFANEHQDPPLEQSSEPAPSSFESNRVTDGTVQVDHGDIRSIDWSFLNSLDNSNEVASGNYNDLYYELDKMHSGELYPTSPPHLLDNGDPNEGDDAFSQQSLILWNF 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0591 214 CDD AP2 25 85 IPR001471 GO:0003700|GO:0006355
Glsi10g0591 214 MobiDBLite consensus disorder prediction 115 132 - -
Glsi10g0591 214 Pfam AP2 domain 25 75 IPR001471 GO:0003700|GO:0006355
Glsi10g0591 214 SMART rav1_2 26 89 IPR001471 GO:0003700|GO:0006355
Glsi10g0591 214 MobiDBLite consensus disorder prediction 113 132 - -
Glsi10g0591 214 FunFam Ethylene-responsive transcription factor 2 25 84 - -
Glsi10g0591 214 ProSiteProfiles AP2/ERF domain profile. 26 83 IPR001471 GO:0003700|GO:0006355
Glsi10g0591 214 MobiDBLite consensus disorder prediction 1 26 - -
Glsi10g0591 214 SUPERFAMILY DNA-binding domain 25 84 IPR016177 GO:0003677
Glsi10g0591 214 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 148 - -
Glsi10g0591 214 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Glsi10g0591 214 PRINTS Ethylene responsive element binding protein signature 49 65 IPR001471 GO:0003700|GO:0006355
Glsi10g0591 214 MobiDBLite consensus disorder prediction 7 23 - -
Glsi10g0591 214 Gene3D AP2/ERF domain 25 84 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0591 Glsi-ChrGlsi10 3708207 3708851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0591 25 214 AP2-EREBP Transcription Factor Family AT1G74930 47.716 1.92e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi10g0591 AP2 3e-13 CL0081