Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0581 ATGACTCCAAAGAAGATTACATGGAAGTCTATTATCTTCATCATAAGTTGTTACAAGACTAACTACCCCTTGCAGGAAAAACAGGTTTTGAAAAAAGGTTCTTTCCAGAGGCTATGCCTCTCGGACATAAGCAATTCCAGCTCCACTCAGGCCATTGACGATCTTTCAGTTTCTCTCGTTGGCTCAAAACTTCATATTTTCACTCTAGAGGAGCTCAGACAGACAACACATAATTTCTCGTGGAGTAATCTGCTTGGTGAAGGAGGGTTTGGACCCGTGCACAAGGGATTTTTTGAAGACAAACTTAGGCCCGGATTGAAGGCTCAGCCCGTAGCTGTCAAACGCCTGAAATTGGACGGCCTGCAAGGTCACAGGGAGTGGCTGGCAGAGATTATATTTCTTGGACAGCTAAGGCATCCACATCTTGTTAAGTTAATTGGGTACTGTTATGAGGAGGAGCACAGGCTTTTGGTGTATGAATACATGCCAAGAGGCAGCTTGGAGAATCAACTCTTCAGAAGATACTCTGCTGCCTTGCCATGGTCAACCAGGATGAAAATTGCATTAGGAGCGGCTAAAGGCCTAGCCTTCCTTCACGAAGTAGATAAACCAGTAATATTCAGGGATTTTAAAGCCTCGAATATCTTACTAGACTCGGATTACACAGCTAAACTGTCAGATTTCGGGCTAGCTAAGGATGGCCCTGAAGGAGAAGACACGCATGTAACAACACGCATAATGGGCACACAGGGCTATGCTGCTCCGGAGTATATCATGACAGGTCACCTTACCACAAAGAGCGATGTGTATAGCTATGGAGTCGTTCTGTTAGAATTAATAACAGGGAAACGGGTAGTGGATAAGAACCGGCCAAGTAGAGAGCATAGCCTGGTGGAGTGGGCAAGGCCTGTGTTGAAGGATCAAAGAAAGTTCCATCGCATTATAGACCCCAGACTGGAAGGCCAATATCCTGCGAAAGGAGCTCAGAAGGTGGCTGCATTGGCTTACAAATGTTTGAGTCACCAACCAAATCCAAGGCCCACAATGAGCGATGTGGTCAGGATATTGGAGTCACTTCAGGACTTTGACGATATATTCATAGGACCATTTGTGTATGTAGCCGTAAGTGAAAGTGGAGACACGGATGTTCTAAAACGCCAAAAAGGAGCATAA 1173 0.4535 MTPKKITWKSIIFIISCYKTNYPLQEKQVLKKGSFQRLCLSDISNSSSTQAIDDLSVSLVGSKLHIFTLEELRQTTHNFSWSNLLGEGGFGPVHKGFFEDKLRPGLKAQPVAVKRLKLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCYEEEHRLLVYEYMPRGSLENQLFRRYSAALPWSTRMKIALGAAKGLAFLHEVDKPVIFRDFKASNILLDSDYTAKLSDFGLAKDGPEGEDTHVTTRIMGTQGYAAPEYIMTGHLTTKSDVYSYGVVLLELITGKRVVDKNRPSREHSLVEWARPVLKDQRKFHRIIDPRLEGQYPAKGAQKVAALAYKCLSHQPNPRPTMSDVVRILESLQDFDDIFIGPFVYVAVSESGDTDVLKRQKGA 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0581 390 Gene3D Transferase(Phosphotransferase) domain 1 162 366 - -
Glsi10g0581 390 PANTHER OS01G0588500 PROTEIN-RELATED 51 360 - -
Glsi10g0581 390 CDD STKc_IRAK 85 359 - -
Glsi10g0581 390 Pfam Protein tyrosine and serine/threonine kinase 82 356 IPR001245 GO:0004672|GO:0006468
Glsi10g0581 390 FunFam Probable serine/threonine-protein kinase PBL8 162 370 - -
Glsi10g0581 390 FunFam Serine/threonine-protein kinase BIK1 45 161 - -
Glsi10g0581 390 SUPERFAMILY Protein kinase-like (PK-like) 55 358 IPR011009 -
Glsi10g0581 390 ProSiteProfiles Protein kinase domain profile. 79 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0581 390 Gene3D Phosphorylase Kinase; domain 1 40 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0581 Glsi-ChrGlsi10 3652453 3654302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0581 65 356 Glycoside Hydrolase AT3G07070 53.898 9.64e-105 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Glsi10g0581 PK_Tyr_Ser-Thr 2e-49 CL0016