Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0567 ATGGAAGATTACATGTTCAAAACCACGACGACCTCTTTTGCTTTACTAGTTGTCTATATTATGATTAAACTCGTCCATAATATTTGGTGGAGACCCAAAAGTGTGGAGAAATTATTAAGGAAGCAAGGGATTGGAGGTAGTTCCTACAGGCTTTTGAGTGGAGACATGGCAGAGATGAAGAAGTCTGCCCACGAGGCATCATCTAAACCAATCACCCTCGACAGTCAAATCCTGCCTCGAGTCATCCCTTTCTTTCACAAAATGGTACAGCAACATGGAAAAGTTTCTCTCTGTTGGTATGGAAGCAGTCCAAGGCTGATAATAGGGGACGTAGAGCTGATCAGGTTGATATTATCAAATAAGAATGGCCACTTTGTGATGCCCTCACATAACCCACTGGTGAAACTTCTACAATTGGGCGTGTCAACCTTGGAAGGTGAAGAATGGAGTAAACGCAGAAGGCTAATAACACCTGCTTTCGTGCTAGACAAGTTAAAGGCAATGGTGCCAGCATTTTATAGCAGCTGTTGCAGCCTGATAGAGCGGTGGCAGATGCTGGTGGACGCCAAAGGATCATGTGAACTTGACGTTGCTCCAGAACTGGGTGTTCTCGCCGGTGACGTTATAGCTCGAACAGCCTTTGGAAGCAGTTACCAAGAGGGAAAGAGGATATTTGAACTCCAAAAAGAGCAAGCCTTGTTGATGCGTGAAGCCTATAACAACATCTACATCCCAGGTTTCAGATTCATACCCACAAAGAAGAACAAGAGGAGGTACCAGTTATACGACCAAATCAAAGCAATATTGAAGGACATGGTCCAGAAAAGAGAGCAGGCAATGAAAAGGGGTGAATTGGGAGGGCATGATTTGTTGGGCTTACTATTGCAGTGCAAAGAACAAAATAATAATTCTCTGACAATTGAGGATGTGATTGAGGAATGCAAGCTATTCTACTTCGCCGGCCAAGAGACCACAGCCAACCTGCTTACATGGACTATGATTTATTTATCTATGCATCCGAATTGGCAAGAAAAGGCAAGAGAGGAGGTATTAGAGATGTGTGGCAGAAGAAGACCTGATTTTGAATCCATAAATCGCCTTAAGATCATATCAATGGTACTGCATGAAGTGCTGAGATTGTATCCACCTTTGCCAGCTATCTACAGATACACCAAGTGTGAAAGCAGGGTAGGAAGCTTATCCATCCCGGCAGGGGTTGAGCTATGTTTACTGTTGATGCATGTTCATTATGATAGCAATTACTGGGGTGAGAAGGCAGCAGAGTTCAACCCAGAGAGGTTCTCGGAAGGGGTTTCAAAAGCTTCAAAGGATCAAATGGCATTCTATCCGTTTGGTTGGGGTCCCAGAATCTGCCTAGGCCAAAACTTTGCCTTCATTGAAGCAAAGATAGCTCTGGCTATGATTCTTCAACATTTCTCGTTTCAGCTGTCACCCTCTTACGCTCATGCGCCTTGCCTTCTCGTCACTGTTAAGCCACAACATGGTGCTCCCATAATTCTACACCGTATCTAG 1533 0.4429 MEDYMFKTTTTSFALLVVYIMIKLVHNIWWRPKSVEKLLRKQGIGGSSYRLLSGDMAEMKKSAHEASSKPITLDSQILPRVIPFFHKMVQQHGKVSLCWYGSSPRLIIGDVELIRLILSNKNGHFVMPSHNPLVKLLQLGVSTLEGEEWSKRRRLITPAFVLDKLKAMVPAFYSSCCSLIERWQMLVDAKGSCELDVAPELGVLAGDVIARTAFGSSYQEGKRIFELQKEQALLMREAYNNIYIPGFRFIPTKKNKRRYQLYDQIKAILKDMVQKREQAMKRGELGGHDLLGLLLQCKEQNNNSLTIEDVIEECKLFYFAGQETTANLLTWTMIYLSMHPNWQEKAREEVLEMCGRRRPDFESINRLKIISMVLHEVLRLYPPLPAIYRYTKCESRVGSLSIPAGVELCLLLMHVHYDSNYWGEKAAEFNPERFSEGVSKASKDQMAFYPFGWGPRICLGQNFAFIEAKIALAMILQHFSFQLSPSYAHAPCLLVTVKPQHGAPIILHRI 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0567 510 Coils Coil 262 282 - -
Glsi10g0567 510 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0567 510 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0567 510 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0567 510 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0567 510 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0567 510 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0567 510 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0567 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Glsi10g0567 510 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0567 510 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0567 510 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0567 510 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0567 510 SUPERFAMILY Cytochrome P450 78 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0567 510 Pfam Cytochrome P450 84 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0567 510 Gene3D Cytochrome P450 66 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0567 510 PANTHER CYTOCHROME P450 FAMILY MEMBER 20 503 - -
Glsi10g0567 510 FunFam Cytochrome P450 734A1 29 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0567 Glsi-ChrGlsi10 3561912 3564075 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0567 8 510 Cytochrome P450 AT3G14690 46.351 2.13e-172 495