Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0553 ATGAGCTTAAGTGCTGCCGAGGATGATTCGGCTTCAGAAATTAATATCCCGGCGGAGATAGACTGGCACATGCTTGACAAATCCAAGTTCTTCTTCCTAGGCGCCGCTTTATTTTCCGGTGTATCGGCTGCGCTTTATCCAATTGTTGTGTTGAAGACCCGCAAGCAGGTTTGTACATCCCAGATTTCTTGCTTCCAAATGTCTTTTTCCATTATGCGCTACGAAGGATTCAGAGGGTTTTACAAAGGTTTTGGCACCTCTTTGACGGGAACAATCCCGGCTCGAGCACTTTACATGGGTGCCCTTGAAGTTACCAAGAGTAATGTTGGCCCTGCTATTGCTGGATTGGGGTTTTCAGATACCACGGCCACCGCCATAGCCAATGCTGCTGCTGGAGTGAGTTCTGCTATGGCCGCACAATTAGTGTGGACTCCAATTGATGTTGTCAGCCAAAGACTCATGGTCAGCGGTAGCAAGAATATACTCCCCAATGTTCATTCTGGGAATTACAGGAATGGTCTTGATGCCTTCAGGAAAATTCTTTGTACCGATGGACTGCCAGGATTCTATAGGGGATTTGGGATTTCAATATTGACTTATGCACCATCCAATGCTGTTTGGTGGACTTCTTACTCAATGGTCCATAGGCTCATCTGGAGTGCTTTTGGTTGCTCTATGGGTAAGAGAGATGAGAGGAATTTGGCCAACGGGTGTGGTTTTAGGCCTGATTCGAAGGCTATGGTAGCAGTCCAAGGGTTGAGTGCAGTTATGGCCAGTGGGGTTTCAGCTATCATAACTATGCCACTTGACACAATCAAGACGAGGTTGCAGGTGTTGGATGCTGAGGAAAATGGACGAAGGAAGCCATTAACTGCAATGCAGACAGTTAGGAATTTGGTGAAGGAAGGTGGCTTCCTTGCTTGTTACAGAGGTTTGGGGCCAAGGTGGGCTTCAATGTCCATGTCTGCAACAACCATGATTACTACCTACGAGTTTTTGAAACGAATGTCTACCAAGAGTCAAGACAAATTAACTGCATAG 1041 0.4649 MSLSAAEDDSASEINIPAEIDWHMLDKSKFFFLGAALFSGVSAALYPIVVLKTRKQVCTSQISCFQMSFSIMRYEGFRGFYKGFGTSLTGTIPARALYMGALEVTKSNVGPAIAGLGFSDTTATAIANAAAGVSSAMAAQLVWTPIDVVSQRLMVSGSKNILPNVHSGNYRNGLDAFRKILCTDGLPGFYRGFGISILTYAPSNAVWWTSYSMVHRLIWSAFGCSMGKRDERNLANGCGFRPDSKAMVAVQGLSAVMASGVSAIITMPLDTIKTRLQVLDAEENGRRKPLTAMQTVRNLVKEGGFLACYRGLGPRWASMSMSATTMITTYEFLKRMSTKSQDKLTA 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0553 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 217 IPR018108 -
Glsi10g0553 346 Pfam Mitochondrial carrier protein 249 340 IPR018108 -
Glsi10g0553 346 Pfam Mitochondrial carrier protein 40 107 IPR018108 -
Glsi10g0553 346 Pfam Mitochondrial carrier protein 124 219 IPR018108 -
Glsi10g0553 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 246 336 IPR018108 -
Glsi10g0553 346 Gene3D Mitochondrial carrier domain 30 345 IPR023395 -
Glsi10g0553 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Glsi10g0553 346 SUPERFAMILY Mitochondrial carrier 23 333 IPR023395 -
Glsi10g0553 346 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 11 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0553 Glsi-ChrGlsi10 3472893 3473933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0553 1 342 Chloroplast and Mitochondria Gene Families AT1G72820 66.667 2.94e-164 461