Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0537 ATGTCTACCCACCAGCCATTTGATGGTAGCGCTCTACCCTCAAACACCACCTTGGTGGCCGTAGACAAAGACAAGAACAGTGCCCATGCTTTCCGATGGGCAATTAATCATCTTGATAGCCCCATAATCATCGCTGTCCACGTTAGGCACAAAAACAATATTCCACATCAGGGCACGAATGTTTTTCCCCCTGACGAGAACGATGTAGCCAACGTTTTCTCTGCCTTACGAGCAATATGTCCTCATAAACTGGTCCAGATAAAAGAGGCAGTAGTTGATGATAGTGATGTTGTCAAAGGAATTTCAGACTTTGCATACAAGAATCACATCCATAGTATCGTTATGGGTGCAACGACCAGGAACGCTCTGGCAAGGAAATTTATAGGTTATGATTTGCCAACAGCCATGATCAAATCAGCTCCAGATTATAGTTCTGTATACGTAATTTCAAAAGGGAAGATAGTCTCAGCTCGATCAGCAATACGTCCCATGGCTAATACGGCTCTTCCACCAAAACAACCGCCTACGCAGGCACTTATACCAACTGATACGGAAAATGGAGTAAGGGCACAGTCAAGTACGAGCGGGGGGACGAACGAAGGATCGGAAAGAACGTCTTTTGAGAGGACCAATAATGCAGTAAGAACACCAGTACGCGAGAGGCCAAAGAGTTCTGCTAACAGTGTGTCAATGGACAACATTGACCTACCCAATCGTGGACAGAGGTCATCATTTAGCCGCGATTCTGTTTCGGACGATAGTGCTTTTCCAGGAACATTTAAGTTTGGGTCAATGGATGTAAGTAAACAAGATATGGAATCAAGCTTCACGTCTGATAGCTCCAGGTCCTCATCCTCTTCCCAACCCTCAAGAGAATTAGAAGCTGAGATGAAGAGATTGAGGCTTGAACTGAAGCAAACGATGGACATGTACAGCTCGGCATGCAAAGAAGCAATCTCAGCCAAAAATAAGGCTAATGAGATTAATCAATGGAAACTGGAGGAGTACCGTAAGGTTGAGGAAGCTAGATTGTCTGGAGAGGCTGCTCTTGCAATGGCAGAAAAGGAGAAGGCTAAAGCCAGAGTTGCCATGGAAGTAGCTGAGGAAGCCAAGAGGATGGCTGAGAAGGAAGCACTGAGAAGAAAACATGCAGAGATGAAAGCCAGGAAAGTGGCAGAAGAGAAGGACCGAGCATTAACCGCTTTAGCTCAAAATGATGTTCGATATAGAAAATACACCATAGAGGAAATTGAGACAGCTACTGAAAAGTTCTCCCAATCACTGAAAATAGGCGAAGGTGGATATGGACCGGTGTATAAAGGCCAACTGGATCACACCCCAGTCGCGATCAAAATCTTAAGACCTGATGCTGCTCAGGGCAGGAAGCAGTTCCAACAAGAGGTTGAGGTATTAAGCTGCATTAGACATCCTAATATGGTCCTCCTCCTTGGTGCCTGTCCTGAGTATGGGTGCTTGGTGTATGAATACATGGAAAATGGTAGCTTAGAAGATAGATTACTTCGGAAAAATAACAGCCCGCCTATTTCATGGAGGTTACGGTTCGTAATAGCTGCTGAGATTGCTACAGTACTTCTTTTCCTTCACCAAAGCAAGCCAGAGCCCCTTGTGCACCGGGACCTCAAACCAGCCAACATTCTCTTAGACCGGAATTACGTGAGTAAAATCAGCGATGTTGGCCTGGCACGATTAGTTCCTCCTTCTGTGGCTGATAGTGTCACACAATACTACATGACTTCGGCTGCTGGAACCTTCTGTTACATTGATCCTGAGTATCAACAAACAGGAATGTTAACAACTAAATCAGATATATATTCGCTAGGGATAATGCTACTTCAAATTATCACAGCCAAGCCTCCCATGGGTCTTGCTCACCACGTCAAGAGGGCCATTGAGAAGGAAAAATTATCAGAGATGCTTGATCCTGCGGTGACAGATTGGCCACTTGAAGAGGCTCTAGCATTTGCCAAACTGGCTGTGAGCTGTGCAGAGCTTAGCAAGAAGGACAGGCCCGATCTTGCAACAGTTATAGTGCCTGAGCTTAATCGGTTAAGAGACCTTGGATGTACATCACACAATAGTCCTATTGATTGCAGTTATAATCAGAGTCATAGCCAAGCGGGAAACCCTCCGACACCTACAAGAAATCCACGGCCAAAGACATTGAGTAGGACTCAGGGGAGCAGAGCGCATCCCACTTTAGATCAAATGGATCATTGCAAGAGCTTGGGATTCATCAAAAGAAGCTGGTTTTCTTGGTTCTTAAGAGTTGGGTTTTTGGGTCTGGCTGTGTTTGCCAAAGTGACATCGGAGGACAAAGTTGAATCGCCTTCAAGTGGTTTACTTTGTATCAGTGAGTGTGCCACATGCCCAGTAATATGTTCACCGCCCCCTCCTTCACTTCTCACATATTACCCACCGCCATCCCCAGCAATTCCCCATTCCCCGTCCCCATCTTATTTCACCTTCTCACCGCCACCCCCAAAGTCACCAGCGTCGCCGCCGCCGCCTCCTCCTCTTCCTCCATCATCACCACCACCACCACCAACCCCTTCCGCACATTCTTCAGGAGCCGCTCCCCCGCCACCTTTGAAGTCCTACAACACACCTCCTTCGGGTTCTGGCCAGCCTACAGTAATAGAGGGGCCACATGGTTACTCCTATCCTTATTACTATTTTTACGCCTCCGACGCTTCTTTGCCTTCCAGTTATGCAGCATTTTTTCTCTTTGTATCGTGCCTTCATCAGCAACCATTTCGGGAGCTTCGAAAATGGAGTCTGAAGGTGCGGCGGAGGAGATGCCGCCCGTCACTAGCCTCCGACTTCCAGCACCCCTATGTCTCTGAACTCCTCTCCTTCACCCTCGATCGCCTTCACAAGGAACCTGAACTACTTCGAGTTGATGCGGAGCGGATTCGGAGGCAAATCCATGAGGTTGCAGTGGGTAATTACCGAGCATTCACTGCTGCCGCCGACGCCTTGCTTGCTATTCGAGAGGAAATAAATGAGATCCCAAAGCTGACATCCGGATGCAGTGAGTTCACAGAATGCGTTGAACAGATTTTGAATAAGAGGAAGATGAACCAAACAATGCTGGCCAATCACAGTACCTTGGTTGACTTGCTAGAAATTCCTCAACTTATGGGGGGTGGAGGGAGGGGGGGAGAAGAATTTATAGTTTACTTGTTAAAGTCAAATGGCCACATATTAATGCTCTCACATGACCTGTTCTGA 3252 0.4699 MSTHQPFDGSALPSNTTLVAVDKDKNSAHAFRWAINHLDSPIIIAVHVRHKNNIPHQGTNVFPPDENDVANVFSALRAICPHKLVQIKEAVVDDSDVVKGISDFAYKNHIHSIVMGATTRNALARKFIGYDLPTAMIKSAPDYSSVYVISKGKIVSARSAIRPMANTALPPKQPPTQALIPTDTENGVRAQSSTSGGTNEGSERTSFERTNNAVRTPVRERPKSSANSVSMDNIDLPNRGQRSSFSRDSVSDDSAFPGTFKFGSMDVSKQDMESSFTSDSSRSSSSSQPSRELEAEMKRLRLELKQTMDMYSSACKEAISAKNKANEINQWKLEEYRKVEEARLSGEAALAMAEKEKAKARVAMEVAEEAKRMAEKEALRRKHAEMKARKVAEEKDRALTALAQNDVRYRKYTIEEIETATEKFSQSLKIGEGGYGPVYKGQLDHTPVAIKILRPDAAQGRKQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMENGSLEDRLLRKNNSPPISWRLRFVIAAEIATVLLFLHQSKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYYMTSAAGTFCYIDPEYQQTGMLTTKSDIYSLGIMLLQIITAKPPMGLAHHVKRAIEKEKLSEMLDPAVTDWPLEEALAFAKLAVSCAELSKKDRPDLATVIVPELNRLRDLGCTSHNSPIDCSYNQSHSQAGNPPTPTRNPRPKTLSRTQGSRAHPTLDQMDHCKSLGFIKRSWFSWFLRVGFLGLAVFAKVTSEDKVESPSSGLLCISECATCPVICSPPPPSLLTYYPPPSPAIPHSPSPSYFTFSPPPPKSPASPPPPPPLPPSSPPPPPTPSAHSSGAAPPPPLKSYNTPPSGSGQPTVIEGPHGYSYPYYYFYASDASLPSSYAAFFLFVSCLHQQPFRELRKWSLKVRRRRCRPSLASDFQHPYVSELLSFTLDRLHKEPELLRVDAERIRRQIHEVAVGNYRAFTAAADALLAIREEINEIPKLTSGCSEFTECVEQILNKRKMNQTMLANHSTLVDLLEIPQLMGGGGRGGEEFIVYLLKSNGHILMLSHDLF 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0537 1083 CDD STK_N 16 152 - -
Glsi10g0537 1083 MobiDBLite consensus disorder prediction 826 874 - -
Glsi10g0537 1083 MobiDBLite consensus disorder prediction 268 291 - -
Glsi10g0537 1083 MobiDBLite consensus disorder prediction 826 884 - -
Glsi10g0537 1083 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 129 - -
Glsi10g0537 1083 SMART serkin_6 424 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0537 1083 FunFam U-box domain-containing protein 51 497 697 - -
Glsi10g0537 1083 Coils Coil 350 396 - -
Glsi10g0537 1083 Coils Coil 290 310 - -
Glsi10g0537 1083 ProSitePatterns Serine/Threonine protein kinases active-site signature. 542 554 IPR008271 GO:0004672|GO:0006468
Glsi10g0537 1083 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 397 496 - -
Glsi10g0537 1083 PANTHER OS02G0152300 PROTEIN 18 700 - -
Glsi10g0537 1083 Pfam Dor1-like family 953 1054 IPR007255 GO:0017119
Glsi10g0537 1083 MobiDBLite consensus disorder prediction 178 253 - -
Glsi10g0537 1083 MobiDBLite consensus disorder prediction 724 738 - -
Glsi10g0537 1083 Pfam Protein kinase domain 426 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0537 1083 ProSiteProfiles Protein kinase domain profile. 424 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0537 1083 PRINTS Proline rich extensin signature 830 847 - -
Glsi10g0537 1083 PRINTS Proline rich extensin signature 715 727 - -
Glsi10g0537 1083 PRINTS Proline rich extensin signature 848 873 - -
Glsi10g0537 1083 PRINTS Proline rich extensin signature 801 817 - -
Glsi10g0537 1083 Gene3D Transferase(Phosphotransferase) domain 1 497 700 - -
Glsi10g0537 1083 SUPERFAMILY Protein kinase-like (PK-like) 407 683 IPR011009 -
Glsi10g0537 1083 MobiDBLite consensus disorder prediction 166 294 - -
Glsi10g0537 1083 Pfam Universal stress protein family 18 129 IPR006016 -
Glsi10g0537 1083 MobiDBLite consensus disorder prediction 706 741 - -
Glsi10g0537 1083 Gene3D HUPs 6 132 IPR014729 -
Glsi10g0537 1083 Gene3D Phosphorylase Kinase; domain 1 402 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0537 Glsi-ChrGlsi10 3353696 3369598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0537 87 694 Receptor kinase-like Gene Family AT5G12000 63.785 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Glsi10g0537 Pkinase 2.9e-40 CL0016