Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0534 ATGTTGGAGCTCCTTGCCGTGTTGGTGCTTAATATTCCTACCAAGATTAACAAGGGTACTGTAGAAATTATCACCCCTGTGGAACTCATTAGGAAGGGTGATAAGGTTGGCTCTTCTGAAGCTACTTTGCTTGCAAAACTTGGGATTAGGCCCTTCTCATATGGGCTTGTGGTCCTATCTGTGTATGACAATGGTTCAGTTTTCAGCCCTAAGGTTCTGGATCTCACTCGCCCTGTGGTTGTCATATTTGGAGCTTATGCTTAA 264 0.4432 MLELLAVLVLNIPTKINKGTVEIITPVELIRKGDKVGSSEATLLAKLGIRPFSYGLVVLSVYDNGSVFSPKVLDLTRPVVVIFGAYA 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0534 87 Pfam Insertion domain in 60S ribosomal protein L10P 10 49 IPR040637 -
Glsi10g0534 87 Gene3D - 10 54 IPR043164 -
Glsi10g0534 87 Gene3D - 55 76 IPR043141 -
Glsi10g0534 87 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 9 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0534 Glsi-ChrGlsi10 3344290 3344699 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0534 9 81 Cytoplasmic Ribosomal Protein Gene Family AT3G09200 87.671 7.53e-39 128