Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0524 ATGTGGTCCAAGCTCCGTTTTCTAATCAAGAGCTCCACGCTTTCTTTCGACCCACCCATGGGTGCTTCAGGAAAATGGGTAAGAGCATTCATCGGACTCAAGAAACCCGAAAAGGATGACCATCCCAAGGAGGGCAAGAGCAAGAAGTGGAGGTTATGGAGGAGTTCTTCAGGGGATATGGCTTCCTGGAAGGGTTTCAAAGCAAACCACAAACCGACTTCGGAGGGCTCTGATTCCCCACCTCTACCCGATGCTTTTACTGCTGCTATGGCCACTGTGGTCCGAGCTCCGCCTAAGGATTTTAGAGTTGTCAGGCAAGAGTGGGCCGCAATAAGAATCCAAACTGCTTTTCGCGGCTTCTTGGCAAGAAGGGCTTTAAGGGCATTGAAAGGAGTGGTAAGGCTTCAAGCTCTTGTTCGAGGTCGACAAGTGAGGAAGCAGGCCGCAGTGACCTTGAGGTGCATGCAGGCTCTAGTTCGTGTTCAAGCTCGAGTAAGGGCTCGTCGTGTGCGAATGTCCATAGAAGGGCAGGCAGTGCAAATGATGCTTGATGAACGTCGCAGCAAGGCTGATCTCTTAAAACAAGCTGAGGAGGGATGGTGTGATAGCAAAGGAACACTGAAAGATGTCAAAGCTAAATTACAGATGAGACAAGAAGGAGCGTTTAAGAGAGAGAGAGCAATTGCATATTCTCTTGCTCAGAAGCAATGGAGATCGACCCCTTCGAATTCCCGAACAAATGCCTCGCTGTGCTCTCTCAAGAATAATGAGATCGACAAGTCTAACTGGGGATGGAGTTGGTTGGAACGTTGGATGGCAGCGAAGCCCTGGGAAAGTAGATTAATGGAACAATCCCAGACTGAGGCCTCTGATAAAACCCCAACTACTAAGAAATTTGTAGATTCCTTGGCAAGCTCAAATTCAAAATCTTCAGAATCATGCTTAGTCAAAGTCAGAAAGAACAATGTCACCACAAGGATTTCCGCTAGGCCTCCCCATGTTGGGCAAGTTACTCGTGCATCCTCAAGTCCAAGTTCTGAGTTTCTATATGACGAGAGCTCCGCATCTTCTTCAATTTGCACATCCACGACACCCATATCCGGGAACACCGTATTGGCCTCCGATAGGACAGAAGATAGCAGTATCAGTAGGCCGAGTTACATGAACCTCACTGAGTCAACGAAGGCAAAGCAAAAAGGGAGCAGTCATGTGTATCACAGAGCTCAAAGGCAGCAGTCCATGGACGAGTTTCAATTTCTCAAAAGGTCAGCGATTTTCTCTAATGGGGATTCTAAAAGCACTGCTGGTTCTGGTTCTGACCCTTCAATCAACTTTTCAAGGCCATTTTACCTTCCGACCCATTTGGATAAGAGCTCAAAATGA 1383 0.4765 MWSKLRFLIKSSTLSFDPPMGASGKWVRAFIGLKKPEKDDHPKEGKSKKWRLWRSSSGDMASWKGFKANHKPTSEGSDSPPLPDAFTAAMATVVRAPPKDFRVVRQEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQMMLDERRSKADLLKQAEEGWCDSKGTLKDVKAKLQMRQEGAFKRERAIAYSLAQKQWRSTPSNSRTNASLCSLKNNEIDKSNWGWSWLERWMAAKPWESRLMEQSQTEASDKTPTTKKFVDSLASSNSKSSESCLVKVRKNNVTTRISARPPHVGQVTRASSSPSSEFLYDESSASSSICTSTTPISGNTVLASDRTEDSSISRPSYMNLTESTKAKQKGSSHVYHRAQRQQSMDEFQFLKRSAIFSNGDSKSTAGSGSDPSINFSRPFYLPTHLDKSSK 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0524 460 MobiDBLite consensus disorder prediction 428 446 - -
Glsi10g0524 460 PANTHER IQ-DOMAIN 5-RELATED 20 426 - -
Glsi10g0524 460 Gene3D - 105 156 - -
Glsi10g0524 460 ProSiteProfiles IQ motif profile. 130 157 IPR000048 GO:0005515
Glsi10g0524 460 SMART iq_5 128 149 IPR000048 GO:0005515
Glsi10g0524 460 SMART iq_5 105 127 IPR000048 GO:0005515
Glsi10g0524 460 Pfam IQ calmodulin-binding motif 108 127 IPR000048 GO:0005515
Glsi10g0524 460 FunFam IQ-domain 11 105 156 - -
Glsi10g0524 460 ProSiteProfiles IQ motif profile. 106 134 IPR000048 GO:0005515
Glsi10g0524 460 MobiDBLite consensus disorder prediction 325 384 - -
Glsi10g0524 460 MobiDBLite consensus disorder prediction 428 460 - -
Glsi10g0524 460 MobiDBLite consensus disorder prediction 282 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0524 Glsi-ChrGlsi10 3298541 3302240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0524 20 457 IQD Protein Family AT2G26180 62.077 2.38e-155 445