Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0523 ATGGTGCTCATGGAGTGGTTGCTGCCAAGTGTTCCTTCGGCTTCACTAATTTCCACCCTGCTGGCAATTATACTAGGATTCTCGTGTTATTTGTATAGGCCCTGTTGGGGAGTTAGGAAGGTTCCAGGCCCACCATCTCTGCCACTGGTAGGACACCTTCCCCTGCTCGCTAAGTATGGCCCTGATCTCTTCTCAGTCCTCGCCAAACAATATGGCCCAATCTACAGATTTCATATGGGAAGACAGCCACTGATAATTATAGCTGACGCAGAGCTCTGTAAAGAGGTCGGAATCAAAAAATTCAAAGACATTCCAAACAGAAGCATTCCCTCTCCCATTTCCGCTTCCCCTCTTCACCAAAAGGGTCTCTTCTTCACCAGGGATTCAAGATGGTCTACCATGAGAAACACAATATTGTCAGTGTACCAGCCAACACACTTAGCCAGCTTAGTGCCCAAAATGCAGTCATCTATAGAAAATGCAACCCAAAATCTTGACACCACTAAAGAAGACATCATCTTTTCCAACATCTCCCTCAGGTTGGCAACTGATGTAATTGGGGAGGCAGCTTTTGGCGTCAACTTTGGACTCTCTAAGCCTCATTCAGTTTGTGATTTAATAAAGAGTGTTAACGTAGGGGATGCTGCCGATGAAGTTTCAGATTTCATCAACCAACACATATACTCTACAACACAACTTAAGATGGACCTGTCGGGTTCCTTCTCTATCATACTCGGTCTACTTGTCCCTATACTCCAAGAGCCATTCAGGCAGATTTTGAAGAGAATACCAGGCACAAAGGACTGGAAAATTGAGCGTACTAACAAGAAATTGAGTGGGCGTCTTGATGAGATTGTAGAAAAGAGAATGAAAAACAGGGATCCTAGTTCAAAAGATTTCTTGTCTCTCATCCTGAATGCCCGAGAGTCTAAAACGGTATCACAGAGTGTCTTCACACCCGACTATGTTAGTGCAGTTACCTACGAGCACCTACTTGCTGGTTCAGCAACCACTGCCTTTACATTGTCTTCCATTCTCTACTTGGTTGCTGGCCACCCAGAAGTAGAGAAAAAGTTGCTTTCAGAGATTGACGCATTTGGTCCACCTCATCACATACCCACTGCTAATGATCTTCATGACAAATTTCCCTATGTTGATCAGGTGATTAAAGAGGCAATGAGGTATTACACTGTCTCCCCATTAATTGCAAGAGAAACATCAAATGAAGTGGAGATAGGAGGTTACCTTCTCCCAAAGGGGACATGGGTATGGTTAGCGCCCGGAGTTCTAGCAAAAGATCCAAGAAACTTCCCAGAGCCTGAAAAGTTCAAACCAGAGAGGTTTGATCCCAAATGTGAAGAAATGAAACGACGGCACCCTTATGCATTTATACCGTTTGGACTTGGTCCTCGGGCCTGCATCGGTCAGAAATTTTCCCTACAAGAGCTAAAGCTTTCTCTCATTCATTTATACCGCAAATATATCTTTCGGCATTCACCCAACATGGAAAATCCCCTACAACTTGAATATGGTATAGTTCTCAACTTCAAGCATGGTGTAAAGCTGAGAGCCATAAAAAGAACATGGTGA 1590 0.4403 MVLMEWLLPSVPSASLISTLLAIILGFSCYLYRPCWGVRKVPGPPSLPLVGHLPLLAKYGPDLFSVLAKQYGPIYRFHMGRQPLIIIADAELCKEVGIKKFKDIPNRSIPSPISASPLHQKGLFFTRDSRWSTMRNTILSVYQPTHLASLVPKMQSSIENATQNLDTTKEDIIFSNISLRLATDVIGEAAFGVNFGLSKPHSVCDLIKSVNVGDAADEVSDFINQHIYSTTQLKMDLSGSFSIILGLLVPILQEPFRQILKRIPGTKDWKIERTNKKLSGRLDEIVEKRMKNRDPSSKDFLSLILNARESKTVSQSVFTPDYVSAVTYEHLLAGSATTAFTLSSILYLVAGHPEVEKKLLSEIDAFGPPHHIPTANDLHDKFPYVDQVIKEAMRYYTVSPLIARETSNEVEIGGYLLPKGTWVWLAPGVLAKDPRNFPEPEKFKPERFDPKCEEMKRRHPYAFIPFGLGPRACIGQKFSLQELKLSLIHLYRKYIFRHSPNMENPLQLEYGIVLNFKHGVKLRAIKRTW 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0523 529 FunFam Cytochrome P450 3A4 30 528 - -
Glsi10g0523 529 SUPERFAMILY Cytochrome P450 33 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0523 529 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0523 529 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0523 529 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0523 529 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0523 529 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0523 529 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0523 529 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0523 529 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0523 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Glsi10g0523 529 Pfam Cytochrome P450 42 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0523 529 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0523 529 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0523 529 PRINTS P450 superfamily signature 473 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0523 529 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g0523 529 PANTHER THROMBOXANE-A SYNTHASE 15 527 - -
Glsi10g0523 529 Gene3D Cytochrome P450 31 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0523 Glsi-ChrGlsi10 3295470 3298027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0523 79 527 Cytochrome P450 AT2G26170 73.719 0.0 662