Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0519 ATGGCGACATGGTTGGAAGCTTCATATATACGTAGAGAGGAAATTCAAGCTTTTTGTGGTGAGGATTTGATTTTTAAAAGTACTAATGTTTTGTTTCTATTCTACGTTCGCATTTCTCATGTTGGCTTGATCTATAAGCCAAGGAGGAATTCAAAACAGAAAGTTGATCCTTTCTCTTGCAGTTACATTGACAGTGATATTGATGGAGATATGTGGTTGATTTCCTTTTCTGTTAAAGAGTCCCCACACGGCTTCAACTCTATCAAAATGTTGATCTCGATGACTGATATGATTCATCATCTATGGCGGGGCCAAGAGCGGAGGATATTGTGGGGATCGATGGGTAGACAGGCCACTCTGGCACTGCGCAAGATGATGTTGAGAAAGAAGGACAAAGCCATTGAGAAAACAAGTCTGAAAATGGATGGAGCTGGAGAAAGCGGAGGAGCCACGGAGCCAGAGAATCGAAGGATGAGCGCAGACCACGATGACCCAGAACCAACCAGTTCTAAATTAAGACAAGAATCATTGAAGTCGTATTCTTGGTTGACGAACTTCCACCGTGATCTGATGGCTGGCGCGATCATGGGTGGGGTGGTGCACACGATTGTGGCCCCAATTGAGAGGGCGAAACTTTTGTTGCAGACACAAGAAAGCAATATGGCTATTGTTGCCAGTGGGCGTCGCAAATTCGAGGGCATGTTTGATTGTATACTTCGTACTGTCAGGGAAGAAGGGATTCTCTCGTTGTGGAGAGGCAATGGCAGCAGTGTTCTTCGGTATTATCCTTCGGTCGCACTCAATTTCTCGCTCAAGGATCTTTACAGAAACATGTTAAGAAGTGGAAACTATTATGATGATAATATTTTCTCCGGTGCATCTGCTAATTTTATTGCTGGGGCTGCAGCCGGTTGTACGACGCTGGTCTTGGTATACCCACTTGACATTGCACACACCCGCCTTGCTGCTGATATTGGAAGGACTGAAGTGCGTCAATTTCGAGGCATCTACCATTTCCTGGCTACCATATATAGAAAGGATGGGATTGGAGGGATTTACAGGGGCCTTCCTGCGTCTCTACAAGGGATGGTTGTACACCGAGGCCTTTACTTTGGAGGCTTTGATACCATGAAAGAGATATTATCTGAAGAATCAAAACCTGAATTGGCATTGTGGAAACGTTGGGTGGTAGCTCAAGCAGTTACAACCTCTGCTGGGTTGATATCATATCCGTTAGATACAGTTCGAAGGAGGATGATGATGCAGTCTGGGATGGAACAGCCCCTGTACAATAGCACCTTGGATTGCTGGAGGAAGATATATAGGAAAGAGGGATTGGCTTCATTTTATCGTGGGGCAGTTTCCAACATATTTAGGAGCACTGGGGCAGCAGCTATCTTAGTCTTGTATGACGAGGTCAAGAAATTCATGAATTGGAGTGGATTGTGA 1449 0.4493 MATWLEASYIRREEIQAFCGEDLIFKSTNVLFLFYVRISHVGLIYKPRRNSKQKVDPFSCSYIDSDIDGDMWLISFSVKESPHGFNSIKMLISMTDMIHHLWRGQERRILWGSMGRQATLALRKMMLRKKDKAIEKTSLKMDGAGESGGATEPENRRMSADHDDPEPTSSKLRQESLKSYSWLTNFHRDLMAGAIMGGVVHTIVAPIERAKLLLQTQESNMAIVASGRRKFEGMFDCILRTVREEGILSLWRGNGSSVLRYYPSVALNFSLKDLYRNMLRSGNYYDDNIFSGASANFIAGAAAGCTTLVLVYPLDIAHTRLAADIGRTEVRQFRGIYHFLATIYRKDGIGGIYRGLPASLQGMVVHRGLYFGGFDTMKEILSEESKPELALWKRWVVAQAVTTSAGLISYPLDTVRRRMMMQSGMEQPLYNSTLDCWRKIYRKEGLASFYRGAVSNIFRSTGAAAILVLYDEVKKFMNWSGL 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0519 482 MobiDBLite consensus disorder prediction 138 173 - -
Glsi10g0519 482 ProSiteProfiles Solute carrier (Solcar) repeat profile. 393 476 IPR018108 -
Glsi10g0519 482 Gene3D Mitochondrial carrier domain 188 479 IPR023395 -
Glsi10g0519 482 Pfam Mitochondrial carrier protein 294 383 IPR018108 -
Glsi10g0519 482 Pfam Mitochondrial carrier protein 185 280 IPR018108 -
Glsi10g0519 482 Pfam Mitochondrial carrier protein 390 478 IPR018108 -
Glsi10g0519 482 ProSiteProfiles Solute carrier (Solcar) repeat profile. 291 380 IPR018108 -
Glsi10g0519 482 SUPERFAMILY Mitochondrial carrier 185 472 IPR023395 -
Glsi10g0519 482 PRINTS Adenine nucleotide translocator signature 264 276 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi10g0519 482 PRINTS Adenine nucleotide translocator signature 186 198 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi10g0519 482 PRINTS Adenine nucleotide translocator signature 291 304 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi10g0519 482 PRINTS Adenine nucleotide translocator signature 231 252 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi10g0519 482 PRINTS Adenine nucleotide translocator signature 394 410 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi10g0519 482 ProSiteProfiles Solute carrier (Solcar) repeat profile. 184 278 IPR018108 -
Glsi10g0519 482 FunFam probable ADP,ATP carrier protein At5g56450 188 479 - -
Glsi10g0519 482 PRINTS Mitochondrial carrier protein signature 189 202 IPR002067 GO:0055085
Glsi10g0519 482 PRINTS Mitochondrial carrier protein signature 398 420 IPR002067 GO:0055085
Glsi10g0519 482 PRINTS Mitochondrial carrier protein signature 306 324 IPR002067 GO:0055085
Glsi10g0519 482 PRINTS Mitochondrial carrier protein signature 202 216 IPR002067 GO:0055085
Glsi10g0519 482 PRINTS Mitochondrial carrier protein signature 253 273 IPR002067 GO:0055085
Glsi10g0519 482 PRINTS Mitochondrial carrier protein signature 353 371 IPR002067 GO:0055085
Glsi10g0519 482 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 176 480 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi10g0519 482 MobiDBLite consensus disorder prediction 155 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0519 Glsi-ChrGlsi10 3272727 3277363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0519 183 474 Antiporters AT5G13490 40.924 2.02e-63 209