Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0498 ATGGGCAGGAAATGCTCCTATTGTGGAAACTTGGGTCACAATTCAAGGACTTGCAACAGTAACAGAGCGGGTTTTTCCGGTGGGCCAAAGATATTTGGAGTGCAACTTGACCCTTCTTCTTCTTCTTCACCGCATTATTTTGCCATGAAGAGAAGTTTCAGCATGGACTACTTGCCATCTTCGCAGACTTCCTTATATACACCCTCCTCCTCACCCTCTTCTGATGCTTGCTTAGCCAGTGGCCTCGTAGCAAGAACCCAAGAGAGGAAAAAAGGAGTGCCATGGACGGAGGAGGAGCACCGGATTTTTCTCATAGGGCTTAAGAAGCTGGGGAAGGGTGATTGGAGAGGCATCTCTAAGAATTTTGTGACAACAAGAACATCAACTCAAGTGGAAGCAGAAAATATCAGAGGCGAACCAGTTATAACTGTTGGTCCTTTTGGGTTGCCATCAGAGACAAGAGAAGATGTGAGCTGCAGATGCCTCCCGAGTAGTAAAAGGATTCGTCACCCCGAGTGGATTTCAAGTCATCATAAGTCAGTGCTTAATTGGCCTACCTCTTCAGCAAACTGCACTCTTCAAAGCGTAGAACCTGATTTAGAACTCAAACTTGCAGCTCCCACGACTTCTATAAGTTGA 639 0.4617 MGRKCSYCGNLGHNSRTCNSNRAGFSGGPKIFGVQLDPSSSSSPHYFAMKRSFSMDYLPSSQTSLYTPSSSPSSDACLASGLVARTQERKKGVPWTEEEHRIFLIGLKKLGKGDWRGISKNFVTTRTSTQVEAENIRGEPVITVGPFGLPSETREDVSCRCLPSSKRIRHPEWISSHHKSVLNWPTSSANCTLQSVEPDLELKLAAPTTSIS 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0498 212 PANTHER TRANSCRIPTION FACTOR KUA1 3 131 - -
Glsi10g0498 212 Pfam Myb-like DNA-binding domain 94 131 IPR001005 -
Glsi10g0498 212 CDD SANT 94 131 IPR001005 -
Glsi10g0498 212 Gene3D - 95 135 - -
Glsi10g0498 212 NCBIfam myb-like DNA-binding domain, SHAQKYF class 90 131 IPR006447 GO:0003677
Glsi10g0498 212 SMART sant 91 139 IPR001005 -
Glsi10g0498 212 ProSiteProfiles Myb-like domain profile. 87 132 IPR001005 -
Glsi10g0498 212 SUPERFAMILY Homeodomain-like 88 132 IPR009057 -
Glsi10g0498 212 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 131 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0498 Glsi-ChrGlsi10 3185580 3186474 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi10g0498 Myb_DNA-binding 9e-08 CL0123