Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0420 ATGGATGATTTTGTGCCCAGCCTTGTTTGCCAAGAAAACCAAACATGCTTGGAAAGAGAGGTGGTAGATGAAGATTTATACAGTGCTTCCGAGCATGAGTATGTGGACATTTTGATTGATAGGGAGATGAGTCTTGGGTTCAAAAGGGATGAATCTCCGGTGTTGGATAACTGGGTCAAAAGTGCTCGCTTGGATGCTATCAATTGGATTCTCAAAACAAGAGCAACATTCGGTTTTCGATTTCAAACAGCTTATTTGTCTGTCACGTACTTGGATCGATTCCTTTCCAGACGGTCCATTGATAGCGAAAAGTATTGGGCATTTCGGTTACTATCAGTTGCATGCCTTTCTCTGGCTGCCAAGATGGAGGAGTGCAATGTTCCGGCGCTATCAGAGTTTCCTTTAGAAGATTATAACTTGGAAAACAAAGTGATTCAGAGAATGGAGCTTCTAGTGCTGAGCACATTGGAATGGAGAATGGGCTTTATAACTCCCTTTGCTTTTTTGCCTTATTTCATCACAAAGCTCTGCAACGAATCCCCTCCAACTCTATCTCATATTTGGTCCAACACTATGCAACTCGTCTTAACAGTAATGAAAGAGGTCAATTTGATGGATTATAGACCATCTGTGATAGCAGCTGCGGCTAGTTTGGCAGCAATGGATCGGCAATTAACAAGAAAAGCCATAGAATTGAAGATGCGTTCAGTTTCTCAATATAGGATTCCTGAAACTGAAAACATATTTGCGTGCTATAATCTAATTCTGAGGTTATACATGGAGAAAACTAAAACAGACAAGTTGATACATTCCTCGAGTCCTTCAACTATCCGATCGAGGTCAAACAGCGTGCTAGAGAGTTCTTTAGTTAGTTCTGCTGCTACCGCCAAGAGAAGAAGACTCACATTCAATGATCACAAAGAAAGTCATGGCGGCACACATTATGGGAATTAA 954 0.413 MDDFVPSLVCQENQTCLEREVVDEDLYSASEHEYVDILIDREMSLGFKRDESPVLDNWVKSARLDAINWILKTRATFGFRFQTAYLSVTYLDRFLSRRSIDSEKYWAFRLLSVACLSLAAKMEECNVPALSEFPLEDYNLENKVIQRMELLVLSTLEWRMGFITPFAFLPYFITKLCNESPPTLSHIWSNTMQLVLTVMKEVNLMDYRPSVIAAAASLAAMDRQLTRKAIELKMRSVSQYRIPETENIFACYNLILRLYMEKTKTDKLIHSSSPSTIRSRSNSVLESSLVSSAATAKRRRLTFNDHKESHGGTHYGN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0420 317 CDD CYCLIN_AtCycD-like_rpt1 62 158 - -
Glsi10g0420 317 ProSitePatterns Cyclins signature. 63 94 IPR006671 -
Glsi10g0420 317 Gene3D - 56 155 - -
Glsi10g0420 317 Pfam Cyclin, C-terminal domain 163 266 IPR004367 -
Glsi10g0420 317 Pfam Cyclin, N-terminal domain 60 160 IPR006671 -
Glsi10g0420 317 FunFam Cyclin-D5-1 162 252 - -
Glsi10g0420 317 SUPERFAMILY Cyclin-like 27 160 IPR036915 -
Glsi10g0420 317 Gene3D - 156 288 - -
Glsi10g0420 317 SMART Cyclin_C_2 163 293 IPR004367 -
Glsi10g0420 317 SMART cyclin_7 68 154 IPR013763 -
Glsi10g0420 317 SUPERFAMILY Cyclin-like 146 260 IPR036915 -
Glsi10g0420 317 PANTHER CYCLINS 33 257 IPR039361 -
Glsi10g0420 317 FunFam Cyclin-D5-1 58 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0420 Glsi-ChrGlsi10 2702583 2703956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0420 61 240 Core Cell Cycle Gene Families AT4G37630 44.330 1.99e-42 145