Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0401 ATGATGATTTTCAAGTGCCTTCAGATTGTTGTGCTGCTAATTTTCTCTGGCAAATACTCCATAGCAGACTCTAAAACGACATACATAGTACACATGGACAAATCCAATATGCCGGCAAGTTTCAACAATCATCTCCTCTGGTTTGACTCATCACTAAGAACGGTATCAGACTCTGAAGAGATGCTCTACACCTATAAACATGTAGCCCACGGCTTCTCCACAAGGCTAACCATCCAAGAAGCAGACTTACTAGCAAAGCAACCAGGAGTTGTATCCGTCATGCCCGAAGTTCGATACGAGCTTCATACAACTCGAACACCGGAGTTCCTTGGATTAGAAAAAAGCACCACTCTTTTACCTGCCTCTGACAAACAGAGTGAGGTCATCATTGGAGTACTTGACACTGGTGTATGGCCTGAGCACAAGAGCTTCAATGACACCGGACTTGGGCCAGTACCCAGTAGCTGGAAGGGCGAGTGTGAGAGTGGGAAAAACTTCACCGCATCCAACTGTAACCGGAAACTTGTTGGTGCAAGGTTTTTCTCCAAAGGCTATGAAGCAACATATGGACCCATCAACGAAAACACAGAATCAAATTCACCCAGGGATGATGATGGCCACGGAACTCACACCTCAACTACAGCGGCTGGGTCAGCAGTTGCCGGAGCCAGCCTCTTTGGTTTTGCTTCTGGGACAGCAAGAGGGATGGCCACACAAGCCCGAGTGGCAACTTACAAGGTATGTTGGCTGGAAGGATGCTTCGGATCGGACATCGCTGCTGGGATTGACAAGGCCATCGAGGACGGTGTCAATATCCTATCCATGTCTCTTGGGGGAGGCTCAGTGGACTACTACAGAGACATTATTGCAACTGGAGCTTTTAGAGCCACAGCCCACGGAATATTCGTGTCGGCTTCAGCAGGAAATGGTGGTCCTACTGCCGGAAGCTTGGTTAATGTAGCGCCATGGATAACCACCGTGGGCGCCGGAACCATAGACCGTGATTTCCCTGCCTATATCAGCCTTGGAAACGGGAATTCATACACTGGCGTATCTCTTTACCACGGCAAACCGTTGTCTGACTCTCCATTGCCACTTGTTTATGCAGGTAATGTGAGCAACTCATCCAGCGGAGGTCTATGCTTGACTGATAGTTTGATTCCCATAAGAGTTTCGGGAAAAATCGTGATATGTGATCGAGGAGGAAATGCGAGGGTGGAAAAGGGGATTGCGGTAAAAAGCGCAGGGGGCCTTGGGATGATTTTAGCAAACAACGAGGAATACGGGGAAGAACTAGTTGCCGACCCACATCTCCTCCCTGCGGCTGCTTTGGGTCAGAAATCCAGCGACGCATTAAAGAAGTATGTCTTCTCCGATCCCAATCCAACGGCTAAAATTGGTTTTGGAGAGACCCAGTTAGGAGTAGAACCGTCGCCAGTGGTGGCAGCTTTCAGTTCGAGAGGTCCAAATATTTTGACGCCACAAATACTGAAACCAGATATGATAGCACCTGGAGTGAACATCCTAGCAGGGTGGACGGGCGCAGTTGGACCAACTGGGTTGTCCATTGATACCAGGCATGTGAGCTTCAATATCATTTCTGGCACATCGATGTCCTGCCCCCATGTTAGTGGGTTAGCTGCATTCCTAAAGGGAGCTCACCCAGAATGGAGCCCCGCAACTATAAGGTCTGCCCTCATGACAACCGCCTACACTACTTACAAAAATGGGGCAACCTTAAAAGATGTTGCCACTGGGCATCCCGCTACACCATTCGATTATGGTGCTGGACATGTGGATCCACTGGCTGCACTTGATCCTGGTCTTGCGTATGATGCTACCGTCGATGACTATCTGAACTTCTTCTGTGCCTTGAACTACACTTCCCTTCAAATTAAGCTTACCACAGGAAAAGACTTTACCTGCGATTCAAGTAACAAGTACAGAGTGGAAAATTTGAACTATCCATCTTTCGCTGTTCCTCTGGAAACAATTTCAGGCAAACCCACCACTATCCAATATACGAGAATTCTGACTAACGTGGGCACGCCAGCAACATATAAAGTTTCGGTGTCATCTGAGTCTCCCTCGGTGAAGATTGTGGTTGAACCACAAACGCTTAGTTTTAAGGAACTGTATGAGAAGAAGAGCTACACGGTAACATTCACCTCTACTTCAATGCCTTCTGGCACAACCAGCTTTGCTCATCTGGAATGGTCTGATGGGAAACATTATATTGCCACTCCGATTGCTTTTAGCTGGACATGA 2268 0.4797 MMIFKCLQIVVLLIFSGKYSIADSKTTYIVHMDKSNMPASFNNHLLWFDSSLRTVSDSEEMLYTYKHVAHGFSTRLTIQEADLLAKQPGVVSVMPEVRYELHTTRTPEFLGLEKSTTLLPASDKQSEVIIGVLDTGVWPEHKSFNDTGLGPVPSSWKGECESGKNFTASNCNRKLVGARFFSKGYEATYGPINENTESNSPRDDDGHGTHTSTTAAGSAVAGASLFGFASGTARGMATQARVATYKVCWLEGCFGSDIAAGIDKAIEDGVNILSMSLGGGSVDYYRDIIATGAFRATAHGIFVSASAGNGGPTAGSLVNVAPWITTVGAGTIDRDFPAYISLGNGNSYTGVSLYHGKPLSDSPLPLVYAGNVSNSSSGGLCLTDSLIPIRVSGKIVICDRGGNARVEKGIAVKSAGGLGMILANNEEYGEELVADPHLLPAAALGQKSSDALKKYVFSDPNPTAKIGFGETQLGVEPSPVVAAFSSRGPNILTPQILKPDMIAPGVNILAGWTGAVGPTGLSIDTRHVSFNIISGTSMSCPHVSGLAAFLKGAHPEWSPATIRSALMTTAYTTYKNGATLKDVATGHPATPFDYGAGHVDPLAALDPGLAYDATVDDYLNFFCALNYTSLQIKLTTGKDFTCDSSNKYRVENLNYPSFAVPLETISGKPTTIQYTRILTNVGTPATYKVSVSSESPSVKIVVEPQTLSFKELYEKKSYTVTFTSTSMPSGTTSFAHLEWSDGKHYIATPIAFSWT 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0401 755 ProSiteProfiles Serine proteases, subtilase domain profile. 98 605 - -
Glsi10g0401 755 Gene3D - 333 473 - -
Glsi10g0401 755 ProSitePatterns Serine proteases, subtilase family, serine active site. 535 545 IPR023828 -
Glsi10g0401 755 CDD PA_subtilisin_like 339 466 - -
Glsi10g0401 755 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 751 IPR045051 -
Glsi10g0401 755 PRINTS Subtilisin serine protease family (S8) signature 125 144 IPR015500 -
Glsi10g0401 755 PRINTS Subtilisin serine protease family (S8) signature 203 216 IPR015500 -
Glsi10g0401 755 PRINTS Subtilisin serine protease family (S8) signature 534 550 IPR015500 -
Glsi10g0401 755 Pfam Fibronectin type-III domain 652 751 IPR041469 -
Glsi10g0401 755 Pfam Peptidase inhibitor I9 27 102 IPR010259 -
Glsi10g0401 755 SUPERFAMILY PA domain 386 427 IPR046450 -
Glsi10g0401 755 Gene3D - 622 754 - -
Glsi10g0401 755 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 130 141 IPR023827 -
Glsi10g0401 755 SUPERFAMILY Subtilisin-like 101 609 IPR036852 GO:0004252|GO:0006508
Glsi10g0401 755 Pfam Subtilase family 126 597 IPR000209 GO:0006508|GO:0008236
Glsi10g0401 755 Gene3D Peptidase S8/S53 domain 128 618 IPR036852 GO:0004252|GO:0006508
Glsi10g0401 755 FunFam Subtilisin-like protease SBT1.9 17 102 - -
Glsi10g0401 755 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 102 IPR037045 -
Glsi10g0401 755 FunFam Subtilisin-like protease SBT1.5 127 344 - -
Glsi10g0401 755 Pfam PA domain 365 452 IPR003137 -
Glsi10g0401 755 MobiDBLite consensus disorder prediction 191 214 - -
Glsi10g0401 755 FunFam subtilisin-like protease SBT1.5 333 473 - -
Glsi10g0401 755 CDD Peptidases_S8_3 99 571 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0401 Glsi-ChrGlsi10 2593741 2596008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0401 9 755 Subtilisin-like Serine Gene Family AT5G67360 65.421 0.0 1008