Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0389 ATGGAGACTCATGCAGCAAAGAGGAGGGCTGACGCCGCTAGCTTAGCCCAGAAACATTCGTCCAAAAAGAAGCGGGTGGTGTTGGGGGAACTTCCCAATTTATCTAATGCTATCCTTCCAGCAGTTTTGAATCCGGGGTTGGAGCTGCAGAAGCCGAAATGTCGAAAGAGTACGAAGGTCAAGAAGGCTGCGGCGACAACGAAGAGCCTTTCCTTGGAAAATCCTAAGTTGGATGATACGAAGGTCAATGTGAAGAAGACAGTGGACGCTGATTCAAAGTTAGGCACAGGTTCGAAGTTAGATGATCCACAAAAAAGCAAGCCTTATGTTTCGGACATCTATACTTATCTTCGCAAAATGGAGATGGATCCAAAGAGAAGACCGATGCCTGACTACCTCGAGAAAGTTCAGAGAGATGTCACTGTTAACGCGAGAGGAATATTGGTGGATTGGTTAGTGGAGGTTGCCGAGGAATACAAGCTTCTCGCGGACACTCTTTATCTCTCGGTTTCCTACATTGATAGGTTTCTCTCTGCTAATCCTGTCAGTAGGCAGAGGCTTCAGCTGCTGGGTGTTTCATCCATGTTCATTGCATCTAAGTATGAAGAAATCAGCCCTCCTCATGTAGAAGAGTTCTGCTACATTACTGATAACACGTACACCAAGGCAGAGGTCGTAAAGATGGAAGCTGATGTTCTCAGGTCCTTAAGTTTTGAAACGGGCAACCCTACTGTAAAGACGTTTCTAAGGCAAGAACACCGTGAATACGTTCCTAGCCGTATTATTCTGTTATGCAAATATCTAAACCTGGATTCGATTGACACTCGACTGATTGTGTGTAATTATTGGTACAGGAGGTTTGCTGGGATTACTTCTGAGAATCGAAAAACCCCAAATTTACAGATTGAGTGTTTGGGATACTATCTTGCGGAGTTAAGTTTGTTGGACTATAAATGTGTAAAATTCTTGCCTTCCATGGTGGCTGCATCAGTTATTTTTCTTACCAGATTTATCACCTGGCCTAAAGTGCATCCCTGGACTTCAGCTTTGCAAGAATACTCGGGATATAAATCAAATGAATTAGAAGAATGTGTGCTTATCTTACACGATTTGTATTTAGGAAGAAAAGGAGGCTCTTTGCAAGCAATACGGGAGAAATACAAGCAACAGAAATTCAAATGTGTGGCAATCCTGCCTTCCCCTCCTGAGATACCAGTTTCTTACTTTGAAGAAGAAATTTGTCTTAAGACCGTTGTGTGTGTTTCCAGTGAAGAAAGTGAGATACTGAATGGAAATCAGCCTGTACAGTCCTGGAGAACTACTTTAGCTAATATCAGAATTACTAATACTGATTTCCAGCTGCTTTAA 1368 0.4269 METHAAKRRADAASLAQKHSSKKKRVVLGELPNLSNAILPAVLNPGLELQKPKCRKSTKVKKAAATTKSLSLENPKLDDTKVNVKKTVDADSKLGTGSKLDDPQKSKPYVSDIYTYLRKMEMDPKRRPMPDYLEKVQRDVTVNARGILVDWLVEVAEEYKLLADTLYLSVSYIDRFLSANPVSRQRLQLLGVSSMFIASKYEEISPPHVEEFCYITDNTYTKAEVVKMEADVLRSLSFETGNPTVKTFLRQEHREYVPSRIILLCKYLNLDSIDTRLIVCNYWYRRFAGITSENRKTPNLQIECLGYYLAELSLLDYKCVKFLPSMVAASVIFLTRFITWPKVHPWTSALQEYSGYKSNELEECVLILHDLYLGRKGGSLQAIREKYKQQKFKCVAILPSPPEIPVSYFEEEICLKTVVCVSSEESEILNGNQPVQSWRTTLANIRITNTDFQLL 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0389 455 MobiDBLite consensus disorder prediction 1 22 - -
Glsi10g0389 455 Pfam Cyclin, N-terminal domain 112 239 IPR006671 -
Glsi10g0389 455 SUPERFAMILY Cyclin-like 283 403 IPR036915 -
Glsi10g0389 455 SUPERFAMILY Cyclin-like 101 239 IPR036915 -
Glsi10g0389 455 Pfam Cyclin, C-terminal domain 281 400 IPR004367 -
Glsi10g0389 455 FunFam G2/mitotic-specific cyclin 128 241 - -
Glsi10g0389 455 SMART cyclin_7 150 234 IPR013763 -
Glsi10g0389 455 SMART cyclin_7 259 370 IPR013763 -
Glsi10g0389 455 ProSitePatterns Cyclins signature. 145 176 IPR006671 -
Glsi10g0389 455 FunFam Cyclin A1 264 397 - -
Glsi10g0389 455 Gene3D - 112 396 - -
Glsi10g0389 455 Gene3D - 128 241 - -
Glsi10g0389 455 SMART Cyclin_C_2 278 401 IPR004367 -
Glsi10g0389 455 PANTHER CYCLINS 87 395 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0389 Glsi-ChrGlsi10 2546039 2548511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0389 5 411 Core Cell Cycle Gene Families AT1G47210 51.106 3.90e-140 404