Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0381 ATGGCTCCGGAATGGGTTTACAATCTTCGTATCACTTCTAAAGTTGACGTATATAGCTATGGGATTGTCGTATTGGAAATGATAACTGGAAAGAGCCCAACGCAAATGTATAGCCTAGAAAACGAAGGGGGCATAAACCAACGACGCTTTGTCGCGTGGGTGAAGGACAGGATAAACGCTGCTCCTGCGGCCAAGTTTTGGATTGAGGACATAGTGGATCCCAATTTGAAAGGCCAATATGAGACGCCCAAGGTTGAGCTTTTGGTTAAAGTGGCTCTGCAGTGCGTGAAAGATGACATGGATGAAAGACCGTCCATGACCCAAGTAGTGGAGATGCTTCAATTACCTTAA 351 0.4558 MAPEWVYNLRITSKVDVYSYGIVVLEMITGKSPTQMYSLENEGGINQRRFVAWVKDRINAAPAAKFWIEDIVDPNLKGQYETPKVELLVKVALQCVKDDMDERPSMTQVVEMLQLP 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0381 116 ProSiteProfiles Protein kinase domain profile. 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0381 116 Pfam Protein kinase domain 1 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0381 116 SUPERFAMILY Protein kinase-like (PK-like) 1 111 IPR011009 -
Glsi10g0381 116 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 114 - -
Glsi10g0381 116 Gene3D Transferase(Phosphotransferase) domain 1 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0381 Glsi-ChrGlsi10 2477755 2478105 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0381 1 113 Receptor kinase-like Gene Family AT3G58690 38.053 9.41e-20 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Glsi10g0381 Pkinase 5.7e-11 CL0016