Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0369 ATGGGCTCCCCCACTACTCTCCTGACTTTCCTATTCTGCATTAAAAGACGGTCAGTCGGAGGGAAAAAGAAAAAGAAAAAGAAAGAGGATTGTAAGTTTGGTTTTGCTTCGGCGGTTCATGATATTGAAATTATGGCTATGGAGCTTATATCGGGTTATGGGGATGATAGTTTTGCAACCAGGACGGAAGACAATACAATTGCCGTGCAGGAAGCTGCTGCCGCCGGCATTCATAGTGTTGAGAAGCTAATGACCATGATTTCCCAACAACGGCAGCGCCAAGAGGAGGAGGATTCTATCTCCCGAGGGCCTTCGGAATTGGAAGCTGTTGCAGATGTGGCTATGAACAAGTTCAAAAGGGTAATTTCTCTCCTCGATAGGCCAAAAACTGGTCACGCTCGTTTCAGAAAGGCTCCTGCAGCTCGGGCGACGGCGGCGGTTCGGCCATCGATTCCTTTTCTCCAACTACAGCAGACGGTAGATTCCGAAACAAAAGCGCCTTCTCTTATAGAAGGCCAACAAAACAAAACAGGACAAACCTCTGCTTTCAAGGTCTATTGTCCTACACCGATTTTACGTCTCCCGCCCCTGCCTCAAAATCACCACCATCCCCAACTGGGCGCTGCTTCTAGGGTGGCTGACAATGGAATTGTGGAAAAGAAGGAAGCAAATGATAGTATCCATTTAAGAGGGGATACTGAAAGTTTGCAACGGCCCTGTCGGTCGCAGCAGGGGTCGTATATGGGTAAGCCACCTCTGTGTTCAAGTTCTTTGAAGAGGAAGTGCAATTCAATGGACGACGCTGGTCTCAAGTGTGGATCATCCTCTGGGCGGTGCCATTGCTCCAAGAAAAGGAAATCGAAGATAAGGAGAGTAATTAGAGTAGCAGCAATCAGCTCGAAGATGGCTGATATTCCAGCCGATGATTATTCGTGGAGAAAATATGGACAAAAACCTATCAAAGGTTCTCCCCACCCCAGGGGTTATTACAAGTGTAGTAGCGTGAGAGGCTGCCCCGCACGCAAACACGTGGAGCGTGCTCTCGACGATCCTACCATGCTCATTGTCACTTACGAAGCAGATCATAATCACTCCCGCACCGCTTCTGATTCTGATGGTGCAGCGTCCCTCCTCCTCCAATCATCCTAG 1149 0.4874 MGSPTTLLTFLFCIKRRSVGGKKKKKKKEDCKFGFASAVHDIEIMAMELISGYGDDSFATRTEDNTIAVQEAAAAGIHSVEKLMTMISQQRQRQEEEDSISRGPSELEAVADVAMNKFKRVISLLDRPKTGHARFRKAPAARATAAVRPSIPFLQLQQTVDSETKAPSLIEGQQNKTGQTSAFKVYCPTPILRLPPLPQNHHHPQLGAASRVADNGIVEKKEANDSIHLRGDTESLQRPCRSQQGSYMGKPPLCSSSLKRKCNSMDDAGLKCGSSSGRCHCSKKRKSKIRRVIRVAAISSKMADIPADDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPTMLIVTYEADHNHSRTASDSDGAASLLLQSS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0369 382 SUPERFAMILY WRKY DNA-binding domain 304 366 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi10g0369 382 Pfam WRKY DNA -binding domain 308 364 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi10g0369 382 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 69 371 IPR044810 GO:0003700
Glsi10g0369 382 Pfam Plant zinc cluster domain 259 304 IPR018872 -
Glsi10g0369 382 Gene3D WRKY domain 291 367 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi10g0369 382 ProSiteProfiles WRKY domain profile. 301 367 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi10g0369 382 SMART WRKY_cls 306 366 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi10g0369 382 FunFam WRKY transcription factor 65 290 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0369 Glsi-ChrGlsi10 2399824 2401620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0369 59 327 WRKY Transcription Factor Family AT4G24240 44.224 5.23e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi10g0369 WRKY 5e-25 CL0274