Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0364 ATGATGGCTTCAGCTTTCCTGAATATTGTAAACACTACATTAGAATGGGTGACATTGGCTTTAGATGCTCCTTCTGCTCGTGCTGTAGTTTTTGGAGTGCATATTGGCGGACATTTATTTGTTGAAGTGCTTCTCCTGGTGGTCATCCTTTTCCTGCTCTCTCAGAAAAGTTACAAGCCTCCAAAACGGCCCTTAAGAGAGAAGGAAATAGATGAGCTATGTGATGAATGGGTTCCAGAACCCCTAATTCCTCCACTAAGTAAAGAGATGCAGTATGAACCACCAGTACTGGAGAGTGCTGCTGGGCCACATACCATAATTAATGGTAAAGAGATTGTTAATTTTGCTTCCGCAAATTATCTTGGATTGATAGGTCATAAGAAGCTACTTGAGTCATGTTCTTCTGCTTTAGGGAAATATGGCGTTGGTTCTTGTGGTCCTCGTGGGTTTTATGGAACAATTGATGTCCACCTCGACTGTGAAGCCAGAATATCAAAATTTTTGGGAACCCCTGATTCAATTCTCTACTCTTATGGACTTTCCACCATGTTCAGTGCAATTCCTGCTTTCTCTAAAAAAGGGGATATAATTGTTGTGGATGAGGGAGTCCACTGGGGGATACAGAATGGTCTTCATCTTTCTAGAAGCACAGTGGTCTATTTTAAACACAACGACATGGACTCTTTGAGAGAAACTCTGGAGAAAATCACTGTAGAAAATAAGCGGGCCAAGAAATTGAGGCGTTACATTGTTGTTGAAGCTGTCTACCAGAATTCTGGCCAAATTGCACCCTTGGATGAGATCATTAGATTGAAGGAGAAATACCATTTTCGTGTTTTGTTGGATGAGAGCAACTCATTTGGTGTGCTTGGAAGTTCTGGAAGAGGTCTCACTGAATACTTTGGAGTTCCAGTTGAGAAGTTAGATATCATAACTGCTGCCATGGGACATGCTTTGGCATCAGAAGGAGGATTCTGCACTGGAAGTGCCAGAGTTATAGATCACCAACGATTGAGTAGTTCTGGCTATGTCTTTTCTGCTTCTCTGCCTCCATATCTTGCAAGTGCTGCAATTACAGCTATTGACATCCTTGAGGAAAATCCCAATCTGATAACAAAGCTAAAGAACAACATTGCTGTGTTAAGGAAAGGATTATCAAACATACCGGGCTTCACAATAGCAAGTAATGCAGAATCACCAGTTGTTTATTTGAGATTAGAGAAGTCAACAGGTTCCATGAAAAATGACCTACGCCTGCTTGAAGATATTGCTGAGCGTGTTTTGGAGGAAGATTCTGTATTTGTGGTGGCTTCCAAAAGATCAGCATTGGACAAGTGCCGTTTGGCTGTAGGAATTAAACTGTTTGTTTCGGCGGCTCATTCAGAATCTGATCTTCATAAGGCAGCTGAATCACTGAAAAGGGTTGCGGCATTAGTCCTGAGTGGTCATAATTGA 1455 0.4179 MMASAFLNIVNTTLEWVTLALDAPSARAVVFGVHIGGHLFVEVLLLVVILFLLSQKSYKPPKRPLREKEIDELCDEWVPEPLIPPLSKEMQYEPPVLESAAGPHTIINGKEIVNFASANYLGLIGHKKLLESCSSALGKYGVGSCGPRGFYGTIDVHLDCEARISKFLGTPDSILYSYGLSTMFSAIPAFSKKGDIIVVDEGVHWGIQNGLHLSRSTVVYFKHNDMDSLRETLEKITVENKRAKKLRRYIVVEAVYQNSGQIAPLDEIIRLKEKYHFRVLLDESNSFGVLGSSGRGLTEYFGVPVEKLDIITAAMGHALASEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAITAIDILEENPNLITKLKNNIAVLRKGLSNIPGFTIASNAESPVVYLRLEKSTGSMKNDLRLLEDIAERVLEEDSVFVVASKRSALDKCRLAVGIKLFVSAAHSESDLHKAAESLKRVAALVLSGHN 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0364 484 Gene3D - 126 367 IPR015421 GO:0003824
Glsi10g0364 484 Coils Coil 226 246 - -
Glsi10g0364 484 Gene3D Aspartate Aminotransferase, domain 1 105 470 IPR015422 GO:0003824
Glsi10g0364 484 Pfam Aminotransferase class I and II 111 472 IPR004839 GO:0009058|GO:0030170
Glsi10g0364 484 SUPERFAMILY PLP-dependent transferases 80 476 IPR015424 -
Glsi10g0364 484 FunFam serine palmitoyltransferase 1 isoform X1 126 367 - -
Glsi10g0364 484 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 37 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0364 Glsi-ChrGlsi10 2363522 2369742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0364 2 336 Acyl Lipid Metabolism Gene Families AT4G36480 78.209 0.0 569